Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PXI10_RS08270 Genome accession   NZ_CP118900
Coordinates   1571194..1572162 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain BDS5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1566194..1577162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXI10_RS08245 (PXI10_08245) cdsA 1567104..1567829 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  PXI10_RS08250 (PXI10_08250) - 1567838..1568176 (-) 339 WP_002852397.1 hypothetical protein -
  PXI10_RS08255 (PXI10_08255) - 1568178..1569485 (-) 1308 WP_060806487.1 NFACT family protein -
  PXI10_RS08260 (PXI10_08260) mobA 1569547..1570122 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  PXI10_RS08265 (PXI10_08265) pldA 1570119..1571108 (+) 990 WP_060806488.1 phospholipase A -
  PXI10_RS08270 (PXI10_08270) ceuB 1571194..1572162 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  PXI10_RS08275 (PXI10_08275) ceuC 1572155..1573093 (+) 939 WP_060806489.1 iron chelate uptake ABC transporter family permease subunit -
  PXI10_RS08280 (PXI10_08280) ceuD 1573090..1573845 (+) 756 WP_002896069.1 ABC transporter ATP-binding protein -
  PXI10_RS08285 (PXI10_08285) ceuB 1573858..1574850 (+) 993 WP_032586806.1 enterochelin ABC transporter substrate-binding protein CeuB -
  PXI10_RS08295 (PXI10_08295) - 1575076..1575630 (-) 555 WP_060806490.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=796143 PXI10_RS08270 WP_002874446.1 1571194..1572162(+) (ceuB) [Campylobacter jejuni strain BDS5]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=796143 PXI10_RS08270 WP_002874446.1 1571194..1572162(+) (ceuB) [Campylobacter jejuni strain BDS5]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994