Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   PYV58_RS01730 Genome accession   NZ_CP118892
Coordinates   387278..389503 (-) Length   741 a.a.
NCBI ID   WP_034617817.1    Uniprot ID   A0AAX3PLU7
Organism   Acinetobacter sp. TAC-1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 382278..394503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYV58_RS01710 (PYV58_01710) - 382451..382789 (-) 339 WP_004725521.1 chaperone modulator CbpM -
  PYV58_RS01715 (PYV58_01715) - 382831..383799 (-) 969 WP_034617833.1 DnaJ C-terminal domain-containing protein -
  PYV58_RS01720 (PYV58_01720) - 384146..385021 (-) 876 WP_004725526.1 Hsp33 family molecular chaperone HslO -
  PYV58_RS01725 (PYV58_01725) - 385105..387000 (-) 1896 WP_004816746.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  PYV58_RS01730 (PYV58_01730) priA 387278..389503 (-) 2226 WP_034617817.1 primosomal protein N' Machinery gene
  PYV58_RS01735 (PYV58_01735) gspF 389672..390877 (+) 1206 WP_004725548.1 type II secretion system inner membrane protein GspF -
  PYV58_RS01740 (PYV58_01740) gspG 390917..391354 (+) 438 WP_004816754.1 type II secretion system major pseudopilin GspG -
  PYV58_RS01745 (PYV58_01745) - 391636..391971 (+) 336 WP_034617821.1 hypothetical protein -
  PYV58_RS01750 (PYV58_01750) - 392048..392311 (-) 264 WP_034617824.1 DUF2798 domain-containing protein -
  PYV58_RS01755 (PYV58_01755) - 392651..392989 (+) 339 WP_034617827.1 tRNA-binding protein -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84288.66 Da        Isoelectric Point: 8.8802

>NTDB_id=796093 PYV58_RS01730 WP_034617817.1 387278..389503(-) (priA) [Acinetobacter sp. TAC-1]
MSNTLATPQTIYRIQVAVPVYLNDCFDYQVTAEQYAQAEVGARVAVSFGRQNLIGVIVKKVPIDEPVDSHFKLKAITELL
DEQAILDSKVLSLLTWSSQYYQFPIGEVIQTALPTLLRQGKPYNLLARIWKLLDLHAEDKVKRSEKQQEAYKILKLHPKG
TQENILNLSGVETATLKVLEKKDIVRCDLEPQNVTPEPVQLAQMPLTPNDDQKKAIQAILKAQKKYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDTKRLQAWQHAQTGKASIILGTRSAIYTPL
PHLGLIILDEEHDLSFKQQEGFRYHARDVAMYRAHLENCPIILGSATPSIDSYYLARQEKLTRIELNQRAGAAIMPKMHL
IDLKVAKKQHGLSDVLIAEIKKRLEKKEQVLIFLNRRGYAPVLICESCGWQANCPNCDAHFTLHLKPYQHLHCHHCGTIN
RMPDACPQCNQQQLKPIGMGTAKVEETLNELFPHFPVLRVDRDSTSRVGSWQKIYDQIQKSEPTILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRATERTAQLIIQVAGRAGRGEMKGEVYLQTLRPDHPLLNTLIHNDYRTFAKQTLKDRQAALL
PPFRYTALIRCDSKHQEENLKFLTEMTQLLRQTAEENLIDIWGPIPAPMERKAGRYQAHVVLLSQDRAKMHFYIRQWWQQ
LLHSKPSTMKVTIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=796093 PYV58_RS01730 WP_034617817.1 387278..389503(-) (priA) [Acinetobacter sp. TAC-1]
ATGTCGAATACCCTTGCTACGCCACAGACGATTTATCGTATTCAAGTTGCTGTTCCAGTCTATTTGAATGACTGCTTTGA
TTACCAAGTCACCGCTGAACAATATGCGCAAGCTGAAGTCGGTGCGCGTGTTGCAGTGTCTTTTGGCAGACAAAATCTGA
TTGGTGTTATTGTTAAGAAAGTACCGATTGATGAACCTGTGGATTCTCATTTTAAACTCAAAGCCATTACTGAACTGTTA
GATGAACAGGCCATTCTAGACAGTAAAGTTTTAAGTTTATTGACATGGTCATCACAATATTATCAATTTCCTATCGGTGA
AGTGATTCAAACGGCGTTACCTACCTTATTACGCCAAGGTAAACCTTATAATTTATTGGCACGTATCTGGAAACTTTTAG
ACTTACATGCCGAAGACAAAGTTAAGCGTTCTGAAAAACAACAAGAAGCCTATAAAATTTTAAAGCTACACCCGAAAGGG
ACACAGGAAAATATTCTTAATTTAAGTGGTGTTGAAACAGCCACACTCAAAGTCCTTGAGAAAAAAGACATTGTTCGTTG
TGATTTAGAACCACAAAATGTCACGCCAGAACCTGTGCAATTGGCACAGATGCCCCTCACGCCAAATGACGATCAGAAGA
AAGCCATTCAAGCGATTTTAAAAGCGCAGAAAAAATATCAAGCATTTCTATTGGATGGTTTAACTGGGAGTGGTAAAACC
GAAGTTTATTTGCAAGTGATGCATGAAGTACTTAAACAAGGCAAACAAGTCTTGGTTTTAGTGCCTGAAATCGGCTTAAC
TCCACAAACCATCAGCCGTTTTCAATCACGTTTTCATTGCAATATTGCCTTACTGCACTCAGGCTTAAATGACACTAAAC
GTTTACAAGCATGGCAGCATGCGCAAACGGGCAAAGCCTCTATTATTTTAGGCACACGTTCTGCAATTTATACACCTTTG
CCACATTTGGGTTTGATTATTTTAGATGAAGAGCATGATCTTTCGTTTAAACAACAAGAAGGCTTTCGCTATCATGCTCG
CGATGTGGCCATGTATCGTGCACATTTAGAAAATTGCCCGATTATCTTAGGTTCTGCCACGCCTAGTATTGACAGTTATT
ATCTTGCTCGCCAAGAAAAGCTGACACGGATTGAGTTAAATCAACGTGCTGGTGCCGCAATCATGCCGAAAATGCATTTG
ATTGATTTAAAAGTGGCAAAAAAACAGCATGGCTTAAGTGATGTTTTGATTGCTGAAATCAAAAAACGTTTAGAGAAAAA
AGAACAAGTTCTGATTTTTTTAAATCGCCGCGGTTATGCCCCTGTGCTTATCTGTGAAAGCTGTGGTTGGCAGGCCAATT
GCCCCAATTGCGATGCTCACTTTACCCTGCATTTAAAGCCTTATCAGCATTTACATTGTCACCATTGTGGCACGATTAAT
CGTATGCCTGATGCTTGCCCTCAATGCAATCAACAACAATTAAAGCCAATTGGCATGGGAACTGCCAAAGTTGAAGAAAC
CTTGAATGAGCTGTTCCCTCATTTCCCCGTCTTGCGCGTAGATCGTGACTCAACCAGTCGGGTTGGCAGTTGGCAAAAGA
TTTATGATCAAATCCAGAAAAGCGAACCGACCATTTTACTTGGCACGCAGATGCTGGCAAAAGGACATCACTTTCCTTAT
GTCACCTTAGTGGCAATTTTGGATATTGATGCAGGTTTGTTGAGTGTGGATTTCCGTGCTACAGAACGTACTGCGCAATT
GATTATTCAAGTTGCAGGTCGTGCGGGTCGTGGTGAAATGAAAGGTGAGGTCTATTTACAAACCCTAAGACCTGATCATC
CGTTATTAAACACCTTGATTCATAATGACTATCGGACCTTTGCCAAACAAACCTTAAAAGATCGCCAAGCCGCACTGCTT
CCACCCTTTCGTTATACAGCTTTGATCCGCTGTGATTCAAAGCATCAGGAAGAAAATTTAAAGTTTCTGACTGAAATGAC
GCAGCTGCTTAGACAAACTGCCGAAGAGAATTTAATTGATATCTGGGGACCTATTCCAGCGCCAATGGAACGTAAAGCAG
GGCGTTACCAAGCCCATGTGGTTTTGCTTTCTCAAGATCGGGCAAAAATGCATTTTTATATTCGCCAATGGTGGCAACAG
CTGTTACATAGCAAACCCTCTACGATGAAAGTCACCATAGATGTTGATCCGCAAGAGTTGAGTTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Helicase conserved C-terminal domain (Helicase_C)

(532-598)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.275

100

0.725