Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   RAM32_RS06050 Genome accession   NZ_CP132361
Coordinates   1237807..1238610 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UNC_SA56     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232807..1243610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAM32_RS06030 (RAM32_06025) - 1234353..1235690 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  RAM32_RS06035 (RAM32_06030) tmk 1235692..1236309 (+) 618 WP_001272126.1 dTMP kinase -
  RAM32_RS06040 (RAM32_06035) - 1236337..1236666 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  RAM32_RS06045 (RAM32_06040) - 1236880..1237806 (+) 927 WP_000344338.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  RAM32_RS06050 (RAM32_06045) yaaT 1237807..1238610 (+) 804 WP_001134193.1 stage 0 sporulation family protein Regulator
  RAM32_RS06055 (RAM32_06050) yabA 1238627..1238974 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  RAM32_RS06060 (RAM32_06055) - 1239248..1239973 (+) 726 WP_000910687.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  RAM32_RS06065 (RAM32_06060) - 1239966..1240214 (+) 249 WP_000373817.1 GIY-YIG nuclease family protein -
  RAM32_RS06070 (RAM32_06065) rsmI 1240216..1241055 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  RAM32_RS06075 (RAM32_06070) metG 1241340..1243313 (+) 1974 WP_001051127.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=796077 RAM32_RS06050 WP_001134193.1 1237807..1238610(+) (yaaT) [Staphylococcus aureus strain UNC_SA56]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=796077 RAM32_RS06050 WP_001134193.1 1237807..1238610(+) (yaaT) [Staphylococcus aureus strain UNC_SA56]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622