Detailed information NTG0795598

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: Q9L40_RS10165
• Genome accession: NZ_CP132190
• Coordinates: 1091073..1093895 (+)
• Length: 940 a.a.
• NCBI ID: WP_305799150.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain DRC187
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1086073..1098895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9L40_RS10145 (Q9L40_10145)	csrD	1086267..1088225 (-)	1959	WP_305898156.1	RNase E specificity factor CsrD	-
Q9L40_RS10150 (Q9L40_10150)	ssb	1088403..1088936 (-)	534	WP_113612467.1	single-stranded DNA-binding protein	Machinery gene
Q9L40_RS10155 (Q9L40_10155)	qstR	1089228..1089872 (+)	645	WP_071178319.1	LuxR C-terminal-related transcriptional regulator	Regulator
Q9L40_RS10160 (Q9L40_10160)	galU	1090045..1090917 (+)	873	WP_001920788.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
Q9L40_RS10165 (Q9L40_10165)	uvrA	1091073..1093895 (+)	2823	WP_305799150.1	excinuclease ABC subunit UvrA	Machinery gene
Q9L40_RS10170 (Q9L40_10170)	-	1093960..1095744 (+)	1785	WP_305799149.1	oligosaccharyltransferase	-
Q9L40_RS10175 (Q9L40_10175)	-	1095882..1097270 (+)	1389	WP_305798922.1	IS4-like element ISVa18 family transposase	-
Q9L40_RS10180 (Q9L40_10180)	-	1097336..1098454 (-)	1119	WP_032478780.1	alanine--glyoxylate aminotransferase family protein	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104313.88 Da
• Isoelectric Point: 6.5995

>NTDB_id=795598 Q9L40_RS10165 WP_305799150.1 1091073..1093895(+) (uvrA) [Vibrio cholerae strain DRC187]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD
GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNFYYFQML
TALAEHYDFDVHTPFNKLSKKIQDIILHGSGRTEIEFKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYI
SNKSCSSCDGTRLKIEARNVFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTVLVVEHDEDAIRMADHVIDIG
PGAGVHGGMVVAEGNVQEIIANPNSLTGQYLSGVKKIAVPERRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGV
SGSGKSTLINDTFFKIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYPPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDAREFFD
PVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN

Nucleotide

• Length: 2823 bp

>NTDB_id=795598 Q9L40_RS10165 WP_305799150.1 1091073..1093895(+) (uvrA) [Vibrio cholerae strain DRC187]
ATGGACAAAATCGAAGTACGCGGCGCTCGTACCCATAACCTCAAAAATATCAATCTGACCATTCCTCGTGACAAATTGAT
TGTCATCACCGGGCTCTCTGGCTCAGGTAAATCCTCACTGGCTTTTGATACGCTCTACGCAGAAGGTCAACGGCGTTATG
TCGAATCACTCTCGGCTTATGCGCGCCAATTCCTTTCTCTGATGGAAAAGCCGGATGTAGACCACATTGAGGGGCTTTCA
CCCGCGATTTCGATTGAGCAGAAATCCACTTCCCATAACCCACGCTCTACCGTGGGTACGATTACGGAAGTGTATGACTA
TTTACGTCTACTCTACGCTCGGGTTGGGGAACCACGCTGCCCCGAACACCAAGTGCCACTGAAAGCGCAAACCATCAGTC
AGATGGTAGACAAAGTACTGGAATTGCCAGAAGGCAGCAAAATGATGCTGCTGGCAACCATAGTCAAAGAGCGTAAAGGC
GAACACGTTAAAACGTTAGAAAATTTAGCCGCGCAAGGCTTTATTCGTGCGCGTATCGATGGTGAAACCTGCGATCTGAC
CGATCCACCAAAACTCGAACTGCACAAAAAGCACACCATTGAAGTGATTGTCGACCGTTTCAAAGTGCGCAGTGATCTGC
AGCAACGCTTAGCCGAGTCGTTTGAAACTGCGCTAGAACTTTCCGGCGGTATCGTCGTTGTCGCACCGATGGAAGGTGAT
GGCGAAGAGCAGATTTTCTCGGCTAACTTTGCTTGTCCACATTGTGGTTACAGCATGCGCGAGCTTGAACCACGCCTGTT
CTCTTTCAACAACCCAGCCGGTGCTTGCCCAACCTGTGATGGTTTAGGAGTACAGCAGTATTTCGATCCAGATCGAGTGA
TTCAAGATGCCAATTTAAGTTTGGCGCAAGGGGCAATTCGTGGCTGGGATCAAAAGAACTTTTATTATTTCCAGATGCTG
ACTGCGCTGGCTGAGCACTACGATTTTGATGTACACACGCCCTTCAATAAGCTGAGTAAAAAGATTCAAGACATCATCCT
TCACGGCTCTGGTCGCACCGAAATTGAATTTAAGTACATCAATGATCGGGGTGATATTCGCCTTAAAAAACATCCTTTTG
AAGGAATTTTGCATAATTTGGAGCGCCGCTATCGCGATACCGAATCCAACTCGGTGCGTGAGGAGCTGGCAAAATACATC
TCCAACAAGTCTTGCAGCAGTTGTGATGGTACGCGCTTAAAAATCGAAGCACGCAATGTGTTTATTAATGATACTGCGTT
GCCAACGATTGTAGAACTGAGCATTGCTGATGCGCTAACGTTCTTCCAAGAGCTCAAACTGGAAGGCCAACGTGCACAAA
TCGCTGAAAAAGTGATGAAAGAGATTAATGACCGGCTGCAATTTTTGGTCAATGTCGGGCTCAATTACTTAAATCTCTCG
CGCAGCGCCGAGACGCTTTCCGGTGGCGAAGCTCAGCGTATTCGCCTAGCCAGTCAGATTGGTGCCGGTTTAGTCGGTGT
AATGTATGTCCTTGATGAACCCTCGATTGGCCTCCACCAACGCGACAACGAACGCTTGCTGCAAACCCTCACCCACTTAC
GCAATCTAGGTAATACCGTGTTAGTGGTTGAGCATGATGAAGATGCGATTCGCATGGCAGATCATGTGATTGATATTGGC
CCAGGTGCTGGCGTACACGGCGGCATGGTGGTTGCCGAAGGCAATGTGCAGGAAATCATCGCCAATCCAAACTCACTCAC
AGGTCAATATCTCAGTGGCGTGAAAAAAATCGCGGTACCAGAGCGGCGCACACCAAAAGATGCGAAGAAAACGGTAGAGC
TTAAAGGCGCGGTCGGTAATAACTTAAAAAATGTTGACCTGTCTATTCCTGTTGGCCTGTTTACTTGTGTGACGGGCGTT
TCAGGTTCGGGAAAATCCACTCTGATCAACGATACCTTCTTTAAGATTGCCCATACCGCACTCAATGGCGCGACGACGGC
GACACCTGCGCCTTATCGCTCCATTCAAGGTCTAGAACACTTTGATAAAGTGATCGATATCGATCAGAGCCCAATTGGTC
GCACTCCTCGCTCCAACCCCGCCACTTACACCGGAATCTTCACTCCAATTCGTGAATTGTTTGCCGGAACACAAGAGTCT
CGCTCGCGTGGTTATCCGCCGGGACGCTTTAGTTTCAACGTGCGTGGTGGGCGCTGTGAAGCGTGTCAAGGCGATGGCGT
GATCAAGGTAGAAATGCATTTCTTGCCTGATGTGTATGTACCTTGTGATGTGTGTAAAGGTAAACGCTATAACCGAGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATTGATGAAGTATTGGAAATGACTGTTGAAGACGCACGCGAGTTTTTTGAC
CCAGTACCTGTGATAGCACGTAAGTTGCAAACCTTGATGGATGTTGGGTTGTCCTACATTCGTCTTGGGCAATCAGCCAC
CACCTTATCAGGAGGTGAAGCGCAGCGGGTAAAATTAGCGCGTGAACTCTCCAAACGAGATACGGGCAAAACCCTGTATA
TTTTGGATGAACCAACCACGGGGCTACACTTCCACGATATTCAGCAACTACTGAGCGTACTGCACCGCTTGCGTGACCAT
GGCAATACCGTGGTGGTGATTGAGCATAACTTGGATGTGATCAAAACGGCTGACTGGATCATCGATTTGGGCCCGGAAGG
CGGCCAAGGCGGCGGACTTATTATTGCAGAAGGAACACCAGAAGATGTGGCGCAGATCGAAGCTTCACATACCGCACGTT
TCCTCAAGCCTTTGTTGAATTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.794	100	0.58
uvrA	Streptococcus pneumoniae TIGR4	57.794	100	0.58
uvrA	Streptococcus pneumoniae D39	57.794	100	0.58