Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | HIY_RS00265 | Genome accession | NZ_AP022867 |
| Coordinates | 56641..57153 (-) | Length | 170 a.a. |
| NCBI ID | WP_005651545.1 | Uniprot ID | A0A0H3PJN2 |
| Organism | Haemophilus influenzae strain 2018-Y40 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 51641..62153
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HIY_RS00250 (HIY_00500) | comQ | 54947..55234 (-) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| HIY_RS00255 (HIY_00510) | comP | 55227..55910 (-) | 684 | WP_005655925.1 | DUF2572 family protein | Machinery gene |
| HIY_RS00260 (HIY_00520) | comO | 55925..56641 (-) | 717 | WP_005655922.1 | type II secretion system protein J | Machinery gene |
| HIY_RS00265 (HIY_00530) | comN | 56641..57153 (-) | 513 | WP_005651545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| HIY_RS00270 (HIY_00540) | suhB | 57353..58156 (+) | 804 | WP_005655917.1 | inositol-1-monophosphatase | - |
| HIY_RS00275 (HIY_00550) | nrfE | 58264..60171 (+) | 1908 | WP_005655914.1 | heme lyase NrfEFG subunit NrfE | - |
| HIY_RS00280 (HIY_00560) | - | 60171..60701 (+) | 531 | WP_005655912.1 | DsbE family thiol:disulfide interchange protein | - |
| HIY_RS00285 (HIY_00570) | nrfF | 60698..61852 (+) | 1155 | WP_005655909.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19877.15 Da Isoelectric Point: 8.9743
>NTDB_id=79548 HIY_RS00265 WP_005651545.1 56641..57153(-) (comN) [Haemophilus influenzae strain 2018-Y40]
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=79548 HIY_RS00265 WP_005651545.1 56641..57153(-) (comN) [Haemophilus influenzae strain 2018-Y40]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTATTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTCTACAAGCGGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGTAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTATTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTCTACAAGCGGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGTAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |