Detailed information NTG0795374

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: PYH68_RS00165
• Genome accession: NZ_CP118807
• Coordinates: 39414..40763 (-)
• Length: 449 a.a.
• NCBI ID: WP_353423773.1
• Uniprot ID: -
• Organism: Staphylococcus xylosus strain 7064
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	39414..40760	39414..40763	within	0

Gene organization within MGE regions

Location: 39414..40763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYH68_RS00165 (PYH68_00165)	ccrA	39414..40763 (-)	1350	WP_353423773.1	recombinase family protein	Machinery gene

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52576.33 Da
• Isoelectric Point: 9.9787

>NTDB_id=795374 PYH68_RS00165 WP_353423773.1 39414..40763(-) (ccrA) [Staphylococcus xylosus strain 7064]
MKQAMGYLRQSTTKQQSLPAQKQAIKTLAEKHNIQHITFYSDKQSGRTDKRNGYQQITELIQQGQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIFISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYH
NGTFTIDTVKAPTIKAVFNYYLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI
YEEAQVTRTQKQVKRKPSENQLKQKIKCPYCYSTLTNMTVRKPDHSLRYYVCPQNMNNARFVCEFKGINAQELETSVLTT
CQDFFQNQQLYSKINQTIQQQLKRQRDIETKTTLNHEQLIEKLANGKIDAETFREQTQSLRQQSKPISSISAYQIQRAFQ
NIIQQRFTLNMLYPYIDQIHITKKKSLVGIYFKNEPLNIVNQKIQSSIT

Nucleotide

• Length: 1350 bp

>NTDB_id=795374 PYH68_RS00165 WP_353423773.1 39414..40763(-) (ccrA) [Staphylococcus xylosus strain 7064]
ATTAAACAAGCAATGGGTTACTTACGTCAAAGTACAACAAAACAACAATCACTTCCGGCACAGAAACAAGCCATCAAGAC
ATTAGCTGAAAAACACAATATTCAACACATCACATTTTATAGCGATAAGCAATCAGGACGCACTGATAAGCGGAATGGTT
ACCAACAAATTACTGAACTGATTCAACAAGGACAATGTGACGTACTATGTTGCTATCGTCTAAATCGACTTCATCGTAAT
CTAAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATGTTCATATCTTAAGCGTTCATGATGGCTATTTTGA
TATGGATAAAGCGTTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTAGAATCTGATAATATAGGCGAAC
AAGTCAAAAATGGAATCAAAGAAAAAGCTAAACAAGGTAAAATGATTACAACACATGCACCCTTTGGGTATCACTATCAT
AATGGTACTTTCACAATAGATACAGTAAAAGCACCAACAATAAAAGCTGTGTTCAATTATTACCTTCAAGGTTATGGTTA
TAAAAAAATTGCGCAATACTTAGAAGCTGATGATAAATTCATTAATCGCAAGCCCTATCAAGTGCGTAATATTATCCTTA
ACCCTAATTACTGTGGCCGTGTTATCAATCAATACGGACAATATGAAAACATGTTCCCAGCTATTGTCAGTACAACGATA
TACGAAGAAGCTCAAGTTACCCGAACTCAGAAACAAGTAAAACGTAAGCCGTCAGAAAATCAACTCAAACAAAAAATCAA
ATGTCCCTATTGTTATTCGACACTCACAAACATGACTGTCCGAAAACCAGATCATTCATTGCGTTACTATGTCTGTCCGC
AAAATATGAATAATGCTCGCTTTGTTTGTGAATTTAAAGGAATCAACGCACAAGAATTAGAAACAAGTGTCTTAACGACT
TGTCAGGATTTCTTTCAGAACCAACAGCTGTATTCAAAAATTAACCAAACAATTCAACAACAACTCAAAAGACAAAGAGA
CATAGAAACTAAAACTACACTCAATCACGAACAGCTGATAGAAAAATTGGCCAACGGCAAAATTGATGCAGAAACGTTCA
GAGAACAAACGCAATCCTTACGCCAGCAATCAAAACCTATATCATCAATCAGTGCGTATCAAATTCAAAGAGCGTTTCAA
AACATCATTCAACAACGTTTCACGCTAAACATGTTATACCCTTATATTGATCAAATTCATATCACAAAAAAGAAATCCCT
TGTTGGGATCTATTTCAAAAATGAACCCTTAAACATCGTCAATCAAAAAATACAATCATCGATTACTTAA

Domains

Predicted by InterproScan.

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase (Recombinase) (170-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	92.205	100	0.922
ccrA	Staphylococcus aureus N315	74.61	100	0.746