Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PYH70_RS01170 Genome accession   NZ_CP118789
Coordinates   257940..258605 (+) Length   221 a.a.
NCBI ID   WP_002467354.1    Uniprot ID   -
Organism   Staphylococcus warneri strain 7068     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 252940..263605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYH70_RS01145 (PYH70_01145) - 253535..253984 (+) 450 WP_002467363.1 helix-turn-helix domain-containing protein -
  PYH70_RS01150 (PYH70_01150) - 254219..255685 (+) 1467 WP_002467351.1 poly-gamma-glutamate hydrolase family protein -
  PYH70_RS01155 (PYH70_01155) - 255866..255967 (+) 102 WP_015364644.1 SE2200 family small protein -
  PYH70_RS01160 (PYH70_01160) - 256050..257503 (-) 1454 Protein_228 alkaline phosphatase -
  PYH70_RS01165 (PYH70_01165) - 257760..257918 (+) 159 WP_002467360.1 hypothetical protein -
  PYH70_RS01170 (PYH70_01170) braR 257940..258605 (+) 666 WP_002467354.1 response regulator transcription factor Regulator
  PYH70_RS01175 (PYH70_01175) braS 258611..259507 (+) 897 WP_002467359.1 sensor histidine kinase Regulator
  PYH70_RS01180 (PYH70_01180) - 259611..260357 (+) 747 WP_002467357.1 ABC transporter ATP-binding protein -
  PYH70_RS01185 (PYH70_01185) - 260375..262369 (+) 1995 WP_015364645.1 FtsX-like permease family protein -
  PYH70_RS01190 (PYH70_01190) - 262492..263523 (+) 1032 WP_353422396.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25526.64 Da        Isoelectric Point: 4.9722

>NTDB_id=795275 PYH70_RS01170 WP_002467354.1 257940..258605(+) (braR) [Staphylococcus warneri strain 7068]
MKILIVEDDLVIAESLANELKKWNYDVKMAKQFSHVLDDFKDYLPDLVLLDINLPTLNGFHWCQEMRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCKLIVDEAKLMFQDDVTQLSLTELQIVK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLSQIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=795275 PYH70_RS01170 WP_002467354.1 257940..258605(+) (braR) [Staphylococcus warneri strain 7068]
ATGAAGATTTTGATAGTAGAAGACGACTTAGTCATTGCAGAAAGTTTAGCGAATGAACTTAAGAAATGGAACTATGACGT
TAAGATGGCAAAACAGTTTTCACATGTTTTAGATGATTTCAAAGACTATCTACCTGACTTAGTACTACTAGATATTAATT
TACCAACTTTAAATGGCTTCCATTGGTGCCAAGAAATGAGAAAAATCTCAAACGTACCTATTATATTTATTAGTTCAAGG
ACAGATAATATGGATCAAATAATGGCGATACAAATGGGTGGCGATGATTTTATTGAGAAACCATTTAATTTATCGTTAAC
AGTTGCTAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCTAATAACGAATTAAATGTTAAAGGGTGTA
AACTGATTGTTGATGAGGCTAAGTTAATGTTTCAAGATGATGTGACACAACTGTCTTTAACAGAACTTCAAATCGTTAAA
CTGTTGTTTCAAAATGAAGGTAAATTTGTAAATCGAACAGCTTTAATTGAAAAATGTTGGGAATCAGAGAATTATATTGA
TGATAATACTTTGGCTGTAAATATGACACGATTGCGAAAAAAATTAAGTCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGATATAGGGTGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787