Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6485_RS10130 | Genome accession | NZ_AP022857 |
| Coordinates | 1981715..1982002 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648330.1 | Uniprot ID | A0AAE9P9A9 |
| Organism | Bacillus cereus strain MRY14-0045 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1976715..1987002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6485_RS10110 (BCM0045_1923) | - | 1977889..1978086 (+) | 198 | WP_062921548.1 | DUF4083 domain-containing protein | - |
| L6485_RS10115 (BCM0045_1924) | - | 1978118..1978579 (+) | 462 | WP_000035009.1 | NUDIX hydrolase | - |
| L6485_RS10120 (BCM0045_1925) | nadE | 1978628..1979446 (-) | 819 | WP_062921549.1 | ammonia-dependent NAD(+) synthetase | - |
| L6485_RS10125 (BCM0045_1926) | - | 1979718..1981598 (+) | 1881 | WP_236788246.1 | ABC transporter permease | - |
| L6485_RS10130 (BCM0045_1927) | abrB | 1981715..1982002 (+) | 288 | WP_000648330.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6485_RS10135 (BCM0045_1928) | - | 1982277..1983227 (+) | 951 | WP_001089035.1 | serine protease | - |
| L6485_RS10140 (BCM0045_1929) | - | 1983268..1983576 (-) | 309 | WP_001259894.1 | helix-turn-helix transcriptional regulator | - |
| L6485_RS10145 (BCM0045_1930) | - | 1983684..1984619 (+) | 936 | WP_062921551.1 | aldo/keto reductase | - |
| L6485_RS10150 (BCM0045_1931) | - | 1984668..1985843 (+) | 1176 | WP_062921552.1 | MFS transporter | - |
| L6485_RS10155 (BCM0045_1932) | - | 1986033..1986257 (-) | 225 | WP_000162606.1 | hypothetical protein | - |
| L6485_RS10160 (BCM0045_1933) | - | 1986342..1986689 (-) | 348 | WP_000426313.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10617.34 Da Isoelectric Point: 6.3179
>NTDB_id=79515 L6485_RS10130 WP_000648330.1 1981715..1982002(+) (abrB) [Bacillus cereus strain MRY14-0045]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
Nucleotide
Download Length: 288 bp
>NTDB_id=79515 L6485_RS10130 WP_000648330.1 1981715..1982002(+) (abrB) [Bacillus cereus strain MRY14-0045]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |