Detailed information NTG0795135

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PW274_RS06015
• Genome accession: NZ_CP118775
• Coordinates: 1309028..1310248 (-)
• Length: 406 a.a.
• NCBI ID: WP_047326032.1
• Uniprot ID: -
• Organism: Delftia tsuruhatensis strain ULwDis3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1304028..1315248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PW274_RS05990 (PW274_05990)	-	1304947..1305492 (+)	546	WP_034366065.1	MarR family winged helix-turn-helix transcriptional regulator	-
PW274_RS05995 (PW274_05995)	-	1305485..1306318 (+)	834	WP_264675423.1	class II aldolase/adducin family protein	-
PW274_RS06000 (PW274_06000)	-	1306337..1307362 (+)	1026	WP_043791133.1	2-dehydropantoate 2-reductase	-
PW274_RS06005 (PW274_06005)	cutA	1307415..1307813 (+)	399	WP_034366069.1	divalent-cation tolerance protein CutA	-
PW274_RS06010 (PW274_06010)	-	1307800..1308789 (-)	990	WP_126312518.1	tripartite tricarboxylate transporter substrate binding protein	-
PW274_RS06015 (PW274_06015)	pilA	1309028..1310248 (-)	1221	WP_047326032.1	signal recognition particle-docking protein FtsY	Machinery gene
PW274_RS06020 (PW274_06020)	-	1310277..1311755 (+)	1479	WP_126312519.1	pitrilysin family protein	-
PW274_RS06025 (PW274_06025)	-	1311782..1313143 (+)	1362	WP_126312520.1	pitrilysin family protein	-
PW274_RS06030 (PW274_06030)	rsmD	1313140..1313847 (+)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PW274_RS06035 (PW274_06035)	coaD	1313978..1314478 (+)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42478.34 Da
• Isoelectric Point: 5.5266

>NTDB_id=795135 PW274_RS06015 WP_047326032.1 1309028..1310248(-) (pilA) [Delftia tsuruhatensis strain ULwDis3]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPTAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=795135 PW274_RS06015 WP_047326032.1 1309028..1310248(-) (pilA) [Delftia tsuruhatensis strain ULwDis3]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCACTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTCGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502