Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   QFX55_RS07215 Genome accession   NZ_CP132024
Coordinates   1422877..1423500 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 2.4a     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1417877..1428500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX55_RS07185 - 1418850..1419317 (-) 468 WP_000966142.1 CcdC family protein -
  QFX55_RS07190 - 1419411..1419509 (-) 99 WP_031866183.1 hypothetical protein -
  QFX55_RS07195 - 1419496..1419738 (-) 243 WP_000246909.1 YneF family protein -
  QFX55_RS07200 recP/tkt 1420016..1422004 (-) 1989 WP_000481451.1 transketolase Machinery gene
  QFX55_RS07205 - 1422125..1422364 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  QFX55_RS07210 sosA 1422501..1422734 (-) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  QFX55_RS07215 dinR/lexA 1422877..1423500 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  QFX55_RS07220 - 1423880..1424896 (-) 1017 WP_170961871.1 CAP domain-containing protein -
  QFX55_RS07225 guaC 1424918..1425894 (-) 977 Protein_1388 GMP reductase -
  QFX55_RS07230 rpsN 1426051..1426320 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  QFX55_RS07235 rpmG 1426774..1426923 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=794726 QFX55_RS07215 WP_001208755.1 1422877..1423500(+) (dinR/lexA) [Staphylococcus aureus strain 2.4a]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=794726 QFX55_RS07215 WP_001208755.1 1422877..1423500(+) (dinR/lexA) [Staphylococcus aureus strain 2.4a]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657