Detailed information NTG0794672

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: PW220_RS01170
• Genome accession: NZ_CP118734
• Coordinates: 204471..205184 (+)
• Length: 237 a.a.
• NCBI ID: WP_248055318.1
• Uniprot ID: -
• Organism: Streptococcus iners subsp. hyiners strain 29892
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	199989..212304	204471..205184	within	0

Gene organization within MGE regions

Location: 199989..212304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PW220_RS01155 (PW220_01155)	-	199989..200366 (-)	378	WP_248055305.1	iron chaperone	-
PW220_RS01160 (PW220_01160)	treC	200416..202041 (-)	1626	WP_248055312.1	alpha,alpha-phosphotrehalase	-
PW220_RS01165 (PW220_01165)	treP	202122..204062 (-)	1941	WP_248055315.1	PTS system trehalose-specific EIIBC component	-
PW220_RS01170 (PW220_01170)	treR	204471..205184 (+)	714	WP_248055318.1	trehalose operon repressor	Regulator
PW220_RS01175 (PW220_01175)	-	205240..205551 (+)	312	WP_105117655.1	hypothetical protein	-
PW220_RS01180 (PW220_01180)	-	205548..206096 (+)	549	WP_248055321.1	CvpA family protein	-
PW220_RS01185 (PW220_01185)	-	206132..208465 (+)	2334	WP_248055324.1	endonuclease MutS2	-
PW220_RS01190 (PW220_01190)	-	208484..209196 (+)	713	Protein_202	GNAT family N-acetyltransferase	-
PW220_RS10320	-	209236..209439 (+)	204	Protein_203	triacylglycerol lipase	-
PW220_RS01195 (PW220_01195)	-	209525..209902 (+)	378	WP_248044032.1	DUF1310 family protein	-
PW220_RS01200 (PW220_01200)	-	209910..210281 (+)	372	Protein_205	triacylglycerol lipase	-
PW220_RS01205 (PW220_01205)	-	210350..210730 (+)	381	WP_002935927.1	DUF1310 family protein	-
PW220_RS01210 (PW220_01210)	-	210800..211087 (+)	288	WP_238595317.1	hypothetical protein	-
PW220_RS01215 (PW220_01215)	-	211135..211524 (+)	390	WP_105113562.1	DUF1310 family protein	-
PW220_RS01220 (PW220_01220)	-	211517..211864 (+)	348	WP_248055329.1	hypothetical protein	-
PW220_RS01225 (PW220_01225)	-	211912..212304 (+)	393	WP_248055332.1	DUF1310 family protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27295.05 Da
• Isoelectric Point: 5.4582

>NTDB_id=794672 PW220_RS01170 WP_248055318.1 204471..205184(+) (treR) [Streptococcus iners subsp. hyiners strain 29892]
MKKYQEIYHDLKEKIRTNLYPAETSLPTEQQLQEIYGVSRDTVRKALAMLTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNSLQLSSQTQVVSLEQVTVNSSLASLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAEELVPELTFEIAEKSIY
EYLEGQLGLDIAYAQKEITVEPTSREERDLMQCQDDYLVLIKSRVYLGDTRQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide

• Length: 714 bp

>NTDB_id=794672 PW220_RS01170 WP_248055318.1 204471..205184(+) (treR) [Streptococcus iners subsp. hyiners strain 29892]
ATGAAAAAATACCAAGAAATTTATCATGATTTAAAGGAAAAAATCCGTACAAATCTATATCCTGCAGAAACGTCCTTACC
GACCGAACAACAATTGCAGGAAATCTATGGGGTTAGTCGGGACACGGTACGCAAGGCCTTGGCTATGTTGACAGAAGGAG
GGCTCATCCAAAAGGTTCAGGGACGTGGTTCCATGGTCTTGAAGCAAGAGATCTTGAATTTTCCTGTTTCTGGCTTAACC
TCCTATCAGGAATTGACCAACTCTCTTCAATTGTCTAGTCAGACACAGGTTGTCAGTCTAGAACAGGTGACGGTCAACAG
CAGTCTGGCTAGTTTGACAGGTTTTGAACCCTATAGCAAGGTCTGGAAAGTTGTCCGTACACGTTCTATTGATGGGAAGG
TTTCTGTAGTGGATACGGACTATTTGGCTGAGGAGTTGGTTCCTGAGTTGACTTTTGAGATTGCGGAGAAGTCCATCTAT
GAATACCTAGAAGGTCAGTTGGGCTTGGATATCGCCTATGCGCAAAAGGAAATTACGGTGGAGCCTACCAGTCGGGAAGA
ACGTGATTTGATGCAGTGCCAGGATGATTATTTGGTTCTCATCAAGTCCCGGGTCTATCTGGGGGATACAAGACAGTTCC
AATATACAGAAAGCAAGCATAAGATTGATAAATTCCGATTTGTAGATTTTGCACGCAGAAAACATTCTTTGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, gntR family (GntR) (3-66)

• UTRA domain (UTRA) (91-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	52.137	98.734	0.515