Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   PXH68_RS07055 Genome accession   NZ_CP118733
Coordinates   1547251..1548309 (-) Length   352 a.a.
NCBI ID   WP_248028578.1    Uniprot ID   A0AA96VCI1
Organism   Streptococcus suivaginalis strain 29896     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1542251..1553309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS07030 (PXH68_07030) - 1542470..1543930 (+) 1461 WP_248028574.1 nicotinate phosphoribosyltransferase -
  PXH68_RS07035 (PXH68_07035) nadE 1543943..1544767 (+) 825 WP_248028575.1 ammonia-dependent NAD(+) synthetase -
  PXH68_RS07040 (PXH68_07040) - 1544809..1545342 (-) 534 WP_248028576.1 VanZ family protein -
  PXH68_RS07045 (PXH68_07045) rlmN 1545339..1546451 (-) 1113 WP_248028577.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  PXH68_RS07050 (PXH68_07050) - 1546458..1547138 (-) 681 WP_205031561.1 YutD family protein -
  PXH68_RS07055 (PXH68_07055) sepM 1547251..1548309 (-) 1059 WP_248028578.1 SepM family pheromone-processing serine protease Regulator
  PXH68_RS07060 (PXH68_07060) coaD 1548306..1548785 (-) 480 WP_248028579.1 pantetheine-phosphate adenylyltransferase -
  PXH68_RS07065 (PXH68_07065) rsmD 1548775..1549314 (-) 540 WP_248028580.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  PXH68_RS07070 (PXH68_07070) - 1549428..1550207 (-) 780 WP_248028581.1 hypothetical protein -
  PXH68_RS07075 (PXH68_07075) - 1550258..1550644 (-) 387 WP_248028582.1 rhodanese-like domain-containing protein -
  PXH68_RS07080 (PXH68_07080) - 1550644..1550862 (-) 219 WP_158456675.1 YqgQ family protein -
  PXH68_RS07085 (PXH68_07085) - 1551027..1551626 (-) 600 WP_248028583.1 response regulator transcription factor -
  PXH68_RS07090 (PXH68_07090) - 1551623..1552717 (-) 1095 WP_248028584.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38099.64 Da        Isoelectric Point: 4.0021

>NTDB_id=794643 PXH68_RS07055 WP_248028578.1 1547251..1548309(-) (sepM) [Streptococcus suivaginalis strain 29896]
MKNRRVNRKWELITSIVLGTLLIWFAMFYPLPYYIESPGGAMDVRSVLQVNGEVDQEDGSYNFTYVTVQQATAIKLLFAA
FDSHSDIQSEQEMTGGADSEEYYRIAQFYMETSQNLAKYQGLTLAGKEVTMDFFGVYVLGLAEDSTFQGILNIADTVVSI
NGKTFESSAELIDYVSSLELGSDVTVGYVSSGIEQTADGKIIKLENGKNGIGISLVDHTEVTSDVPIDFQTGNIGGPSAG
LMFTLSIYTQLADPTLRSGRVIAGTGTIEQDGSVGDIGGADKKVLSAAKSGATVFFVPNNPVDEAVLKENPNAKTNYEEA
LEVVEEEGLSIELVPVTTVQDAIDYLEKTKSD

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=794643 PXH68_RS07055 WP_248028578.1 1547251..1548309(-) (sepM) [Streptococcus suivaginalis strain 29896]
ATGAAAAATAGAAGAGTAAATCGGAAGTGGGAGCTAATCACTTCCATCGTCTTGGGAACCCTGTTGATTTGGTTTGCCAT
GTTTTATCCCCTTCCTTACTATATTGAGAGTCCTGGAGGGGCGATGGACGTTCGGTCTGTTCTTCAGGTCAATGGGGAAG
TTGATCAGGAGGATGGCTCCTATAACTTTACCTATGTGACCGTCCAACAAGCTACAGCTATCAAACTCTTGTTTGCAGCG
TTTGATAGTCATTCTGATATCCAATCCGAGCAAGAAATGACAGGTGGAGCAGATAGTGAAGAATACTATCGCATCGCACA
ATTTTATATGGAAACCTCTCAAAATTTGGCTAAGTATCAAGGTTTGACCTTGGCAGGGAAAGAAGTTACCATGGACTTCT
TTGGTGTTTATGTCCTCGGTTTGGCAGAGGATTCGACCTTCCAAGGGATTCTAAATATTGCAGATACGGTTGTGAGTATT
AATGGCAAAACCTTTGAGAGTTCAGCAGAATTGATTGACTATGTCAGCAGTTTGGAATTGGGATCAGATGTGACCGTAGG
TTATGTGTCGAGCGGTATCGAACAAACAGCCGATGGAAAAATCATCAAGCTTGAAAATGGAAAAAATGGGATTGGGATCT
CCTTGGTGGACCATACGGAAGTGACCAGTGATGTGCCGATTGATTTCCAAACAGGAAATATCGGTGGTCCAAGTGCTGGT
TTGATGTTTACCTTGTCTATCTATACGCAGTTGGCAGATCCCACCTTGCGCAGTGGCCGTGTGATTGCAGGAACAGGAAC
CATTGAACAGGACGGTTCCGTCGGTGATATCGGTGGAGCAGATAAAAAGGTACTTTCTGCAGCCAAGTCAGGTGCAACGG
TCTTCTTTGTCCCAAATAATCCTGTTGATGAAGCTGTTTTGAAGGAAAATCCAAATGCCAAAACCAACTATGAGGAGGCC
TTGGAAGTTGTTGAAGAAGAAGGTTTGTCAATCGAGCTTGTTCCAGTAACGACTGTTCAGGATGCCATTGATTATTTAGA
AAAAACTAAGAGCGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

58.529

96.591

0.565