Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PXH68_RS01815 Genome accession   NZ_CP118733
Coordinates   384661..385395 (+) Length   244 a.a.
NCBI ID   WP_158455674.1    Uniprot ID   A0AA96VEM2
Organism   Streptococcus suivaginalis strain 29896     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 379661..390395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS01785 (PXH68_01785) - 380198..381658 (+) 1461 WP_248027177.1 NCS2 family permease -
  PXH68_RS01790 (PXH68_01790) tsaE 381746..382186 (+) 441 WP_205031364.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PXH68_RS01795 (PXH68_01795) - 382179..382697 (+) 519 WP_248027175.1 GNAT family N-acetyltransferase -
  PXH68_RS01800 (PXH68_01800) brpA 382704..383864 (+) 1161 WP_248027173.1 biofilm formation/cell division transcriptional regulator BrpA -
  PXH68_RS01805 (PXH68_01805) - 383876..384184 (-) 309 WP_158455678.1 chemotaxis protein -
  PXH68_RS01810 (PXH68_01810) - 384186..384599 (-) 414 WP_248027171.1 HIT family protein -
  PXH68_RS01815 (PXH68_01815) pptA 384661..385395 (+) 735 WP_158455674.1 ABC transporter ATP-binding protein Regulator
  PXH68_RS01820 (PXH68_01820) - 385392..386438 (+) 1047 WP_248027170.1 ABC transporter permease -
  PXH68_RS01825 (PXH68_01825) ccrZ 386488..387288 (+) 801 WP_172044513.1 cell cycle regulator CcrZ -
  PXH68_RS01830 (PXH68_01830) trmB 387278..387916 (+) 639 WP_248027168.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PXH68_RS01835 (PXH68_01835) - 388138..388323 (+) 186 WP_248027166.1 hypothetical protein -
  PXH68_RS01840 (PXH68_01840) rimP 388340..388810 (+) 471 WP_248027164.1 ribosome maturation factor RimP -
  PXH68_RS01845 (PXH68_01845) nusA 388847..389992 (+) 1146 WP_248027162.1 transcription termination factor NusA -
  PXH68_RS01850 (PXH68_01850) rnpM 390011..390307 (+) 297 WP_248027160.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26813.17 Da        Isoelectric Point: 4.3863

>NTDB_id=794617 PXH68_RS01815 WP_158455674.1 384661..385395(+) (pptA) [Streptococcus suivaginalis strain 29896]
MLEVKNLTGGYANIPVLKDVSFQVGDGELVGLIGLNGAGKSTTIKEIIGLLQPYGGTIKVNDLELSSDLKAYRKQIAYIP
ESPILYEELTLREHIELLALAYELDKEAMWQKADGLLQLFRLQDKLDWFPSTFSKGMMQKVMIICALLLEASLLIVDEPF
LGLDPLAISDLVSLLEKEKALGRSILMSTHVLDSAERLCDRFVVLHSGQVIADGDLGSLRQQFDMPDASLNDIYLTITAS
GVTG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=794617 PXH68_RS01815 WP_158455674.1 384661..385395(+) (pptA) [Streptococcus suivaginalis strain 29896]
ATGTTAGAAGTAAAAAATCTCACGGGCGGTTACGCCAATATTCCAGTCTTAAAAGATGTTAGTTTTCAGGTAGGGGACGG
TGAATTGGTTGGCTTGATTGGCTTAAATGGTGCGGGGAAATCAACGACGATCAAGGAAATTATAGGCCTCTTGCAACCCT
ATGGTGGCACCATCAAGGTCAATGACTTGGAATTGTCATCAGATTTAAAAGCCTATCGCAAGCAAATTGCCTATATACCA
GAGAGTCCGATTTTGTATGAGGAGTTGACCTTGCGGGAGCATATTGAACTGCTGGCTTTGGCTTACGAATTAGATAAAGA
AGCTATGTGGCAAAAAGCGGATGGTTTGTTGCAACTCTTTCGATTGCAGGATAAGTTGGACTGGTTCCCATCTACCTTTT
CAAAAGGGATGATGCAGAAGGTGATGATTATCTGTGCGCTCTTGCTAGAAGCTTCTCTCCTAATTGTGGATGAGCCGTTT
TTAGGTTTGGATCCGTTGGCGATTTCGGACTTGGTCAGCTTGTTGGAAAAAGAGAAGGCGCTAGGGCGGTCGATTTTAAT
GTCAACCCACGTCCTTGACTCTGCTGAGAGATTGTGTGATCGATTTGTTGTGCTCCATAGTGGGCAAGTAATTGCAGATG
GGGATTTGGGTAGCCTGCGGCAGCAATTTGACATGCCAGACGCTAGCTTGAATGACATTTATTTGACCATTACAGCGAGT
GGGGTGACAGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

67.227

97.541

0.656
  pptA Streptococcus thermophilus LMD-9

66.807

97.541

0.652