Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PWO00_RS16795 Genome accession   NZ_CP118718
Coordinates   3257052..3258002 (-) Length   316 a.a.
NCBI ID   WP_221814748.1    Uniprot ID   -
Organism   Priestia aryabhattai strain G5MAi6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3252052..3263002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWO00_RS16765 (PWO00_16760) - 3252132..3253211 (+) 1080 WP_275035971.1 PrsW family intramembrane metalloprotease -
  PWO00_RS16770 (PWO00_16765) - 3253680..3253820 (-) 141 WP_169746700.1 hypothetical protein -
  PWO00_RS16775 (PWO00_16770) - 3254074..3254346 (-) 273 Protein_3237 manganese catalase family protein -
  PWO00_RS16780 (PWO00_16775) - 3254382..3255335 (-) 954 WP_275035972.1 siderophore ABC transporter substrate-binding protein -
  PWO00_RS16785 (PWO00_16780) - 3255360..3256118 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  PWO00_RS16790 (PWO00_16785) - 3256112..3257059 (-) 948 WP_275035973.1 iron chelate uptake ABC transporter family permease subunit -
  PWO00_RS16795 (PWO00_16790) ceuB 3257052..3258002 (-) 951 WP_221814748.1 ABC transporter permease Machinery gene
  PWO00_RS16800 (PWO00_16795) - 3258578..3259384 (-) 807 WP_016764833.1 cell wall hydrolase -
  PWO00_RS16805 (PWO00_16800) - 3259747..3260001 (+) 255 WP_013057893.1 hypothetical protein -
  PWO00_RS16810 (PWO00_16805) - 3260083..3260247 (-) 165 WP_013057894.1 hypothetical protein -
  PWO00_RS16815 (PWO00_16810) - 3260580..3260909 (-) 330 WP_114895971.1 bh protein -
  PWO00_RS16820 (PWO00_16815) - 3260952..3261983 (-) 1032 WP_275035974.1 zinc-binding dehydrogenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35032.31 Da        Isoelectric Point: 9.9189

>NTDB_id=794548 PWO00_RS16795 WP_221814748.1 3257052..3258002(-) (ceuB) [Priestia aryabhattai strain G5MAi6]
MKFYQLILVFAVLSVLSLFVGVQDLSAMDLFHLTKEESHTLFFSRFPRLLSILMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=794548 PWO00_RS16795 WP_221814748.1 3257052..3258002(-) (ceuB) [Priestia aryabhattai strain G5MAi6]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGGTTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACCAAAGAAGAAAGCCACACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTCTTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACCGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTGCTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTTATTTTCTCACTCGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTGGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGAGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
ACTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGGTTGATTATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATTTCCATTG
GGTTAATGGTGGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.649

95.57

0.503