Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PVV54_RS02165 Genome accession   NZ_CP118607
Coordinates   520249..520650 (+) Length   133 a.a.
NCBI ID   WP_274908387.1    Uniprot ID   -
Organism   Pseudomonas sp. PSKL.D1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 515249..525650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVV54_RS02140 (PVV54_02140) pyrR 516186..516704 (-) 519 WP_274908382.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PVV54_RS02145 (PVV54_02145) ruvX 516753..517178 (-) 426 WP_274908383.1 Holliday junction resolvase RuvX -
  PVV54_RS02150 (PVV54_02150) - 517178..517747 (-) 570 WP_274908384.1 YqgE/AlgH family protein -
  PVV54_RS02155 (PVV54_02155) - 518037..518942 (-) 906 WP_274908385.1 energy transducer TonB -
  PVV54_RS02160 (PVV54_02160) gshB 519034..519987 (-) 954 WP_274908386.1 glutathione synthase -
  PVV54_RS02165 (PVV54_02165) pilG 520249..520650 (+) 402 WP_274908387.1 response regulator Regulator
  PVV54_RS02170 (PVV54_02170) pilH 520699..521064 (+) 366 WP_274908388.1 twitching motility response regulator PilH -
  PVV54_RS02175 (PVV54_02175) - 521061..521615 (+) 555 WP_274908389.1 chemotaxis protein CheW -
  PVV54_RS02180 (PVV54_02180) - 521663..523687 (+) 2025 WP_274910373.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14687.96 Da        Isoelectric Point: 6.0773

>NTDB_id=793931 PVV54_RS02165 WP_274908387.1 520249..520650(+) (pilG) [Pseudomonas sp. PSKL.D1]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIIDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKDELLDAIRAHVPGFAAQEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=793931 PVV54_RS02165 WP_274908387.1 520249..520650(+) (pilG) [Pseudomonas sp. PSKL.D1]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAAGC
GGGCTGCGAGGTGATTACCGCCAGTGACGGCTTCGATGCCCTGGCCAAGATAATCGACCACCAGCCACAGATCATTTTCG
TCGACGTGCTGATGCCGCGCCTCGATGGTTACCAGACCTGCGCAGTGATCAAGCACAACAGTGCTTTCAAGGACATCCCG
GTGATTCTTCTGTCATCCCGCGACGGCTTGTTCGACAAGGCCCGTGGCCGGGTGGTCGGCTCTGACCAGTTCCTGACCAA
GCCTTTCAGCAAAGACGAGCTGCTTGATGCGATCAGGGCACATGTGCCCGGGTTCGCCGCGCAAGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647