Detailed information NTG0793864

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PUN47_RS13825
• Genome accession: NZ_CP118599
• Coordinates: 2951556..2952563 (-)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain 10M-VF
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2946556..2957563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUN47_RS13800 (PUN47_13800)	rraA	2947197..2947724 (-)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-
PUN47_RS13805 (PUN47_13805)	-	2947800..2948717 (-)	918	WP_044362398.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PUN47_RS13810 (PUN47_13810)	hslU	2948806..2950137 (-)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
PUN47_RS13815 (PUN47_13815)	hslV	2950179..2950733 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
PUN47_RS13820 (PUN47_13820)	ftsN	2950869..2951426 (-)	558	WP_274888717.1	cell division protein FtsN	-
PUN47_RS13825 (PUN47_13825)	cytR	2951556..2952563 (-)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
PUN47_RS13830 (PUN47_13830)	priA	2952868..2955069 (-)	2202	WP_044362392.1	primosomal protein N'	-
PUN47_RS13835 (PUN47_13835)	rpmE	2955315..2955533 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
PUN47_RS13840 (PUN47_13840)	-	2955745..2957022 (+)	1278	WP_024373675.1	malic enzyme-like NAD(P)-binding protein	-
PUN47_RS13845 (PUN47_13845)	metJ	2957099..2957416 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=793864 PUN47_RS13825 WP_020429332.1 2951556..2952563(-) (cytR) [Vibrio fluvialis strain 10M-VF]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=793864 PUN47_RS13825 WP_020429332.1 2951556..2952563(-) (cytR) [Vibrio fluvialis strain 10M-VF]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGACATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCCACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAGCGCGTGGCACAAATCGCCGGACCGGAAGC
GGCGGTACTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTGCCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGTCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCTCGTCTACTGGAA
ACTCAGCTGGTGGTGCGTGAAAGTGCCGCGCCGCCTCGCTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901