Detailed information NTG0793715

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: Q7572_RS15800
• Genome accession: NZ_CP131878
• Coordinates: 3225079..3226527 (-)
• Length: 482 a.a.
• NCBI ID: WP_002050391.1
• Uniprot ID: A0AA36NX19
• Organism: Acinetobacter nosocomialis strain 2014S01-097
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3220079..3231527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7572_RS15775 (Q7572_15810)	hisD	3220840..3222129 (-)	1290	WP_009499874.1	histidinol dehydrogenase	-
Q7572_RS15780 (Q7572_15815)	hisG	3222235..3222918 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
Q7572_RS15785 (Q7572_15820)	murA	3222918..3224174 (-)	1257	WP_004710509.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
Q7572_RS15790 (Q7572_15825)	ibaG	3224181..3224432 (-)	252	WP_002050455.1	BolA family iron metabolism protein IbaG	-
Q7572_RS15795 (Q7572_15830)	raiA	3224571..3224909 (-)	339	WP_001167461.1	ribosome-associated translation inhibitor RaiA	-
Q7572_RS15800 (Q7572_15835)	rpoN/rpoN1	3225079..3226527 (-)	1449	WP_002050391.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55009.99 Da
• Isoelectric Point: 4.6513

>NTDB_id=793715 Q7572_RS15800 WP_002050391.1 3225079..3226527(-) (rpoN/rpoN1) [Acinetobacter nosocomialis strain 2014S01-097]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESIAESLSTLEKKEADDLTTELNANHLP
DDLPVDTEWDDIYTHQSTALATPEFEEREDNRQVQMTLKEHMLEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAEIEEII
LAVQHLLNDMDIEEDVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPKETEYLKEAKNLLQYYELLIANDLNKL
LKQTGLSKDQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTAGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKDEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=793715 Q7572_RS15800 WP_002050391.1 3225079..3226527(-) (rpoN/rpoN1) [Acinetobacter nosocomialis strain 2014S01-097]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAACTCTTTATCGTTAACACCTCAATTGCAGCAGGCAATCCGTTTACTGCA
GCTCTCAAGTTTAGAATTAGAGCAAGAAATTCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTGGAAGATGAAT
CAATAGCAGAAAGTTTATCCACTTTAGAAAAAAAAGAGGCAGATGATCTTACTACAGAGTTAAATGCAAACCATTTACCT
GATGATTTACCTGTCGATACTGAGTGGGATGACATTTATACCCATCAGTCTACAGCTCTAGCTACACCTGAATTTGAAGA
GCGTGAGGATAACCGTCAAGTTCAGATGACACTTAAAGAGCATATGTTAGAACAAGTCAATTTATTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGTATTGTGGATGCCTTAGATGATAAGGGATTTTTAGATGCTGAGATAGAAGAGATAATC
TTAGCTGTACAACATCTATTAAATGATATGGATATTGAGGAAGATGTTGAGGAAGATGAAGTTTTAGTTGTTTTAAAGCA
TATACAACGGCTTGATCCAATTGGCATTGGTGCTCGTAATCTTGCCGAATGTTTAAAAGTTCAGTTAGAGTTTTTACCTA
AAGAAACTGAATATTTAAAAGAAGCTAAAAATCTTCTTCAATATTATGAGTTATTGATTGCGAACGATCTCAATAAATTA
TTAAAGCAAACAGGTCTTTCTAAAGATCAGTTAAAGTTTGCAGTTGATTTACTAAAGACATTAAAGCCTTACCCAGGTAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGATGTAGTAGTTGCAAAGAAGGATTTACATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAACTAAGAATTAATTCTTTTTATTCAAGCATGATTCGTAGAGCAGATCAAAGTGATGAT
AATTTATATCTACGTAATCAGATGCTTGAAGCTAAGAATTTTATAAAGAGCATTGATGAACGCCATAAAACTTTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCTGAAGCAATGAAACCGTTGGTACTACGGG
ACGTTGCTGAGGAAGTGGAATTACATGAGTCTACAGTTTCTCGGGTCACAACAAATAAATATATGCTAACACCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCACGTGGGAACAACAGCAGGCGGGGAGGCTTCCTCTACCGCCATTCGAGC
TATGATTAAAAAGTTGGTATCCAATGAAAATCCACGTAAACCATTGTCTGATAATGCAATTGCTGCTTTGTTAAAAGATG
AAGGGATAGAAGTGGCTAGAAGGACTGTAGCAAAATATCGAGAATCGTTACATATTCCATCGTCATCCGAAAGAAAAGTC
TTGATCTAG

Domains

Predicted by InterProScan.

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

• Sigma-54 factor, core binding domain (Sigma54_CBD) (110-308)

3D structure

• AlphaFold DB: A0AA36NX19

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	42.885	100	0.456