Detailed information NTG0793652

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: PWW25_RS11115
• Genome accession: NZ_CP118584
• Coordinates: 2383119..2386505 (+)
• Length: 1128 a.a.
• NCBI ID: WP_274876431.1
• Uniprot ID: -
• Organism: Vibrio harveyi strain fish5
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2378119..2391505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWW25_RS11090	erpA	2378460..2378801 (-)	342	WP_005449174.1	iron-sulfur cluster insertion protein ErpA	-
PWW25_RS11095	hemL	2379048..2380343 (+)	1296	WP_005449175.1	glutamate-1-semialdehyde 2,1-aminomutase	-
PWW25_RS11100	-	2380703..2381788 (+)	1086	WP_005449176.1	AI-2E family transporter	-
PWW25_RS11105	rsmC	2381865..2382890 (+)	1026	WP_050924925.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
PWW25_RS11110	-	2382887..2383120 (-)	234	WP_029790366.1	hypothetical protein	-
PWW25_RS11115	chiS	2383119..2386505 (+)	3387	WP_274876431.1	response regulator	Regulator
PWW25_RS11120	-	2387333..2389015 (+)	1683	WP_005446317.1	ABC transporter substrate-binding protein	-
PWW25_RS11125	-	2389186..2390172 (+)	987	WP_005446316.1	ABC transporter permease	-
PWW25_RS11130	-	2390175..2391200 (+)	1026	WP_005446315.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127426.18 Da
• Isoelectric Point: 5.4432

>NTDB_id=793652 PWW25_RS11115 WP_274876431.1 2383119..2386505(+) (chiS) [Vibrio harveyi strain fish5]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKDTALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKHEEIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWAIVVQLPEKEAFARVHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLANEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=793652 PWW25_RS11115 WP_274876431.1 2383119..2386505(+) (chiS) [Vibrio harveyi strain fish5]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATCAC
GCCACTGACGATAACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTTCAAGAACAAAGCACATCGCACCTTCTTT
CAGTTCGTGATACCAAACAACAACAAATCATCGACTACTTTGCAGCTCAAGAGACTGAAGTCATGGGCTTCGTACGCTCC
GAACTTGCTTACGCCAGCGGCGGACGATTCTACGGTTTGGTCAATGCGTTTAGTCGCTTGGGTCACGATATTGATGAAGC
CAGAGAAAACGCACAGCAGCGCTATATCAAAGGCAGTGGCGATCAAATCAAAACCTCGATTTTACCGGAATCATCTAACT
ACGTTGGCAGCGAACGTTACCGCCTATTGCACAAACGTTACCACTGGGCATACCTAGAGCTGTTAAAGCGATCTGATTTT
AATGACATTTTATTGGTTGATATCGATGGTAATGTCACTTACTCAATCAATAAAGACGACAACTATGGCACTAACCTACT
GACAGGACGCTACAAAGATACGGCGCTAGGGCGCACCTTTAAACGTTTGTCTGAAGATGTGAGTGCACGTCGTAAGGTCA
ATGAAGATTACACGCCAGTTGTCGTGTCTGACTTTGATATCGAAAATGGTAAACAGGTCGCTTGGCTCGGCGCACCGATT
GTCCAACAAGGCTACCTGCACAGCTATGCGATGTTCCGCTTACCAAACAACGGCATTACTAAGCTTATTGCTGAAATCAA
CCGCGATTCCTCGATTGAAACCTTACTAGTAGGCAGCGATCATAAACCTCGCACCATTAACACCAAACATGAAGAAATCC
AAAACAGCTTAGAGATTGTCGATAAAGCACTCGCAGGCGACACAGAAGTAGGTACTTACAGCAACCGCTTGGGTGAAGAG
ATGATTGCGGCATTTGCGCCAATTGAAACTCGCGGTCTAACTTGGGCGATTGTCGTACAACTTCCAGAAAAAGAAGCCTT
TGCTCGAGTCCACCAGCTCGAGAAGCTGTTTGTTATTGCGATGCTGATTGCGATCATCTTGGTTGTGATCGCCTCACACT
ACTTATCTAATTTCATCACCTCCCCGCTTCTTAAGCTGACTTGGGCAGCAGAGAAAGTATCTGCTGGTGATCTGGACGAA
ACGACCTTTAATACAGAGCGTAAAGATGAAATCGGTCGACTCGCGATCAGCTTTGAGCGCATGCAACGCTCAATTCGAGA
AAAGATCCAAACCATTAAGCAGCAAAATGAAGAGCTAGAAAGCAACATCAAATTGATCCAAAAGCAAAACGAAGAATTGC
AGTTGGCAGATAAGCTGAAAGATGAGTTCCTAGCGACAACCTCTCACGAGTTACGTACACCATTACACGGTATGGTCGGC
ATTGCAGAGACTTTAGTATCTGGTGCTAATGGTGCAATTCCTGCGAGTCAAAAATACCAATTGGATATCATCATCAAAAG
TGGTCAACGTTTGGCAAATCTTGTTGACGATTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CGGCAGTGAGCCTAGCAAGTGCGACTCGCTTGGTGCTTGAGCTTTCAAGTCATCTACTAGGTAACAAGACGATTCGTATC
ATTAACCAGGTCCCTGCCGATCTAAAAGCGGTGTCTGCCGATCCACAACGCTTGGAACAAGTACTGTACAACCTAATTGG
TAATGCAATTAAATATACTTCTGAAGGTAAGATCGTAATTTCTGCCACCGTCGTGGACGATCAAGTCCGCGTACAAGTGG
TTGATACTGGCCAGGGTATCCCGGCTGAACATCTTGAGCATATCTTTGAACCTTTAATTCAAGCCGGCCAAGACGCTAGT
CGCTACCGTCAAGGCGCTGGCTTGGGTTTATCAATCAGCCGTCAACTTATCGAATTGATGGGTGGATCGTTATATGTAAG
TAGTCAACCAATGGTCGGCACTACATTTAGCTTTACTCTGCCACTTGCTAATGAAGAAGAGATTCAAGCAACACAGAGCC
TTGCGGCGCGTGGACACTTCCAAATTCCAGAAGCGAACTTTGAAAACAACGACGACTTATCATTACCAGAGAACCCTGAT
GGTCCGCTGTTGTATGTTGCTGATGACGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCTGAAACACTTGCTTTAATCGAGCAAGAAAAACCAGAGTTGCTTCTACTCGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTATGTAGTGAGCTTAGAGAGACCTATGATCACGCAGAGCTTCCGATCATTATG
TTGACAGCATTAAGTCAGACAGAAGATCGAGTAAGAGGCTTCGAAGCAGGTGCGAATGACTACTTAACCAAGCCATTCAA
TAAGCAGGAACTCGCCGCACGTATTCAAGCGCACTTAACCGCAAGTAAAGCAGAAATGCGCCACATCGAGAACAAGTTAC
TGGAATCGGAGCTGCGCCAGCGTGCTGAAGTAGAAGCTAGCTTGCTTGAGACTCAAGGTCGGTTATTAGAACAACTAGAA
TCAGCACCTGAAGCCATTATTTGCCTTCGCGAGGATCAACGTATTCGCTTTGCGAACGAAGCGGCATGCAAGCTATTTAA
ACGCAGCTTAGAGCAGTTAAAACGCTCTTCGGCAGATGAACTTATTGCACCTAAATTCCTGACAGTTAAACAACCACATT
ACTGTGGCAAGATTGATATTTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTCAAATTACCTGAAGGCTCT
GGTCTAGATGTTATGTACATCTTTAACGTAGGCGGTGGTGCAAACGCAGCTCGTATCCATAATCTAGAAACCGCGGTTGA
AGTTCTATCAAGTTATGCGTTTGATGGTGATAAAGACCAATTGCAGAAGCTGAAAGAACTTGGCGGTGAGTTTACTCGCC
TTGCAGATAAAGCATTGGGGAACAAGAAAGATAAACAAGAGCTGATGCGCGAAGTGTTGGTCGATACGATGACTCATGCA
TTGGAATACTGGGAATCAGTGACTGGAGAAACTAAGTTTGCTTTTGCGGAGCAAAGTGGTTTATGGCGTGTCTACCTCGA
CCGCAGTACGTTGCAAACTCGGACACTCGATAAATACATGCGCATTGAGACATTACCAAAAACACCGCGCTGGAGAACGG
TTCTAAGCTCAATCGAGTTCATTCTTGAGCACTGTAAAGAACAAAGCCCTGAACGAGCTTACATTGAAGCGCAACGCGAT
AAAATGCAAAGGCTCCTTACAAGTTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.768