Detailed information NTG0079327

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: QMM33_RS09170
• Genome accession: NZ_AP025940
• Coordinates: 1812048..1812947 (-)
• Length: 299 a.a.
• NCBI ID: WP_050204738.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700204
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1807048..1817947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM33_RS09150 (PC0204_17830)	rsmA	1807802..1808674 (-)	873	WP_001216869.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
QMM33_RS09155 (PC0204_17840)	-	1808805..1809113 (-)	309	WP_000333256.1	hypothetical protein	-
QMM33_RS09160 (PC0204_17850)	-	1809106..1809747 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
QMM33_RS09165 (PC0204_17860)	-	1809749..1811779 (-)	2031	WP_050102594.1	bacteriocin-associated integral membrane family protein	-
QMM33_RS09170 (PC0204_17870)	comR	1812048..1812947 (-)	900	WP_050204738.1	helix-turn-helix transcriptional regulator	Regulator
QMM33_RS09175 (PC0204_17880)	rnmV	1813019..1813579 (-)	561	WP_000660004.1	ribonuclease M5	-
QMM33_RS09180 (PC0204_17890)	-	1813579..1814352 (-)	774	WP_000575607.1	TatD family hydrolase	-
QMM33_RS09185	-	1814657..1815415 (-)	759	Protein_1802	DUF1542 domain-containing protein	-
QMM33_RS09190 (PC0204_17920)	rpmH	1815584..1815718 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
QMM33_RS09195 (PC0204_17930)	-	1815863..1817077 (-)	1215	WP_000666471.1	pyridoxal phosphate-dependent aminotransferase	-
QMM33_RS09200 (PC0204_17940)	-	1817233..1817526 (-)	294	WP_000977367.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35399.12 Da
• Isoelectric Point: 4.7732

>NTDB_id=79327 QMM33_RS09170 WP_050204738.1 1812048..1812947(-) (comR) [Streptococcus pneumoniae strain PZ900700204]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=79327 QMM33_RS09170 WP_050204738.1 1812048..1812947(-) (comR) [Streptococcus pneumoniae strain PZ900700204]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365