Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HRS36_RS15565 | Genome accession | NZ_AP022839 |
| Coordinates | 3293051..3294112 (-) | Length | 353 a.a. |
| NCBI ID | WP_173238007.1 | Uniprot ID | A0A6F8T967 |
| Organism | Legionella antarctica strain TUM19329 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3288051..3299112
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS36_RS15540 (TUM19329_31290) | - | 3288271..3288981 (-) | 711 | WP_173238003.1 | dienelactone hydrolase family protein | - |
| HRS36_RS15545 (TUM19329_31300) | - | 3289447..3290313 (+) | 867 | WP_173238004.1 | alpha/beta hydrolase | - |
| HRS36_RS15550 (TUM19329_31310) | rpoH | 3290310..3291164 (-) | 855 | WP_173238005.1 | RNA polymerase sigma factor RpoH | - |
| HRS36_RS15555 (TUM19329_31320) | ftsX | 3291491..3292420 (-) | 930 | WP_173238006.1 | permease-like cell division protein FtsX | - |
| HRS36_RS15560 (TUM19329_31330) | ftsE | 3292414..3293064 (-) | 651 | WP_173238560.1 | cell division ATP-binding protein FtsE | - |
| HRS36_RS15565 (TUM19329_31340) | pilA | 3293051..3294112 (-) | 1062 | WP_173238007.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| HRS36_RS15570 (TUM19329_31350) | - | 3294174..3295499 (+) | 1326 | WP_173238008.1 | M16 family metallopeptidase | - |
| HRS36_RS15575 (TUM19329_31360) | - | 3295496..3296800 (+) | 1305 | WP_173238009.1 | M16 family metallopeptidase | - |
| HRS36_RS15580 (TUM19329_31370) | rsmD | 3296797..3297342 (+) | 546 | WP_173238010.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| HRS36_RS15585 (TUM19329_31380) | dotD | 3297456..3297938 (+) | 483 | WP_173238011.1 | type IVB secretion system lipoprotein DotD | - |
| HRS36_RS15590 (TUM19329_31390) | - | 3297919..3298833 (+) | 915 | WP_173238012.1 | type IV secretion system DotC family protein | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 38518.08 Da Isoelectric Point: 5.3038
>NTDB_id=79313 HRS36_RS15565 WP_173238007.1 3293051..3294112(-) (pilA) [Legionella antarctica strain TUM19329]
MIKWFKRNQAPEALENPENTAESDIETISEQSDELIQPTAEVTKEGIFARFKRGLSKTRHQLGDGIGRLLLGKKEISPEL
MEELETLLISADLGIDTTQTVLKQLTEGLERKELSNGDSVYEALKIHLQSLLGETSQPLALETADKSPFVILMVGVNGAG
KTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNDITVIAQHTGADSASVIFDALQAARARKMDVLIADTAG
RLHTQSNLMEELKKVKRVVQKLEPTAPHETMLVLDASIGQNALIQARQFHEAISLTGITMTKLDGTAKGGILFAIANDLG
IPFRYLGVGEGIEDLRPFDAAQFVGAIFNDDHI
MIKWFKRNQAPEALENPENTAESDIETISEQSDELIQPTAEVTKEGIFARFKRGLSKTRHQLGDGIGRLLLGKKEISPEL
MEELETLLISADLGIDTTQTVLKQLTEGLERKELSNGDSVYEALKIHLQSLLGETSQPLALETADKSPFVILMVGVNGAG
KTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNDITVIAQHTGADSASVIFDALQAARARKMDVLIADTAG
RLHTQSNLMEELKKVKRVVQKLEPTAPHETMLVLDASIGQNALIQARQFHEAISLTGITMTKLDGTAKGGILFAIANDLG
IPFRYLGVGEGIEDLRPFDAAQFVGAIFNDDHI
Nucleotide
Download Length: 1062 bp
>NTDB_id=79313 HRS36_RS15565 WP_173238007.1 3293051..3294112(-) (pilA) [Legionella antarctica strain TUM19329]
ATGATTAAATGGTTTAAACGAAATCAAGCCCCAGAGGCTTTAGAAAATCCAGAAAACACTGCAGAAAGTGACATTGAAAC
AATCTCTGAGCAAAGCGATGAGTTGATTCAGCCTACGGCTGAGGTTACTAAAGAAGGTATTTTTGCACGTTTTAAGCGGG
GTTTAAGTAAAACACGCCATCAATTGGGTGATGGCATTGGTCGTTTATTGCTTGGCAAAAAAGAAATCAGCCCGGAGTTG
ATGGAAGAGTTAGAAACTCTATTAATCAGTGCTGATTTGGGTATTGATACCACCCAGACCGTATTGAAGCAATTAACAGA
GGGTCTAGAGCGCAAGGAATTATCTAACGGAGATTCGGTATATGAGGCTTTAAAAATTCATTTGCAGAGTCTATTAGGCG
AAACTTCACAGCCTTTGGCTTTAGAAACAGCTGATAAATCACCTTTTGTTATTTTGATGGTTGGTGTCAATGGGGCGGGC
AAAACAACTACTATTGGCAAATTAGCCAAGCAATTTCAAAAGCAAGGTAAAAAAGTAATGTTAGCTGCTGGTGATACTTT
CCGAGCTGCGGCAGTAGAGCAGTTGCATGTATGGGGCGAGCGAAATGATATCACCGTCATCGCCCAGCATACAGGGGCTG
ACAGTGCCTCTGTTATATTTGATGCTTTGCAGGCTGCCAGGGCACGAAAGATGGATGTTTTAATTGCTGATACTGCAGGA
CGGCTCCATACGCAAAGTAATCTGATGGAAGAGCTAAAGAAAGTGAAACGCGTAGTACAGAAACTCGAACCTACGGCTCC
TCATGAAACTATGTTGGTGTTAGATGCCAGTATAGGACAGAATGCCTTGATTCAGGCACGACAATTTCATGAAGCAATAA
GTTTGACTGGGATTACGATGACTAAACTTGATGGAACAGCGAAAGGCGGGATATTATTTGCAATAGCTAATGATTTGGGG
ATACCCTTTCGTTATCTAGGTGTTGGTGAGGGCATAGAAGATTTACGGCCCTTTGATGCAGCGCAATTTGTCGGTGCAAT
ATTCAATGATGATCACATTTGA
ATGATTAAATGGTTTAAACGAAATCAAGCCCCAGAGGCTTTAGAAAATCCAGAAAACACTGCAGAAAGTGACATTGAAAC
AATCTCTGAGCAAAGCGATGAGTTGATTCAGCCTACGGCTGAGGTTACTAAAGAAGGTATTTTTGCACGTTTTAAGCGGG
GTTTAAGTAAAACACGCCATCAATTGGGTGATGGCATTGGTCGTTTATTGCTTGGCAAAAAAGAAATCAGCCCGGAGTTG
ATGGAAGAGTTAGAAACTCTATTAATCAGTGCTGATTTGGGTATTGATACCACCCAGACCGTATTGAAGCAATTAACAGA
GGGTCTAGAGCGCAAGGAATTATCTAACGGAGATTCGGTATATGAGGCTTTAAAAATTCATTTGCAGAGTCTATTAGGCG
AAACTTCACAGCCTTTGGCTTTAGAAACAGCTGATAAATCACCTTTTGTTATTTTGATGGTTGGTGTCAATGGGGCGGGC
AAAACAACTACTATTGGCAAATTAGCCAAGCAATTTCAAAAGCAAGGTAAAAAAGTAATGTTAGCTGCTGGTGATACTTT
CCGAGCTGCGGCAGTAGAGCAGTTGCATGTATGGGGCGAGCGAAATGATATCACCGTCATCGCCCAGCATACAGGGGCTG
ACAGTGCCTCTGTTATATTTGATGCTTTGCAGGCTGCCAGGGCACGAAAGATGGATGTTTTAATTGCTGATACTGCAGGA
CGGCTCCATACGCAAAGTAATCTGATGGAAGAGCTAAAGAAAGTGAAACGCGTAGTACAGAAACTCGAACCTACGGCTCC
TCATGAAACTATGTTGGTGTTAGATGCCAGTATAGGACAGAATGCCTTGATTCAGGCACGACAATTTCATGAAGCAATAA
GTTTGACTGGGATTACGATGACTAAACTTGATGGAACAGCGAAAGGCGGGATATTATTTGCAATAGCTAATGATTTGGGG
ATACCCTTTCGTTATCTAGGTGTTGGTGAGGGCATAGAAGATTTACGGCCCTTTGATGCAGCGCAATTTGTCGGTGCAAT
ATTCAATGATGATCACATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.757 |
98.017 |
0.527 |