Detailed information NTG0792817

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PVT72_RS16695
• Genome accession: NZ_CP118495
• Coordinates: 3430401..3431564 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FC02
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3425401..3436564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVT72_RS16665 (PVT72_16665)	-	3425666..3426085 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
PVT72_RS16670 (PVT72_16670)	comFC	3426159..3426848 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
PVT72_RS16675 (PVT72_16675)	-	3426854..3427138 (-)	285	WP_003151389.1	competence protein ComFB	-
PVT72_RS16680 (PVT72_16680)	comFA	3427196..3428581 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
PVT72_RS16685 (PVT72_16685)	-	3428689..3429537 (-)	849	WP_024085866.1	DegV family protein	-
PVT72_RS16690 (PVT72_16690)	degU	3429635..3430324 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PVT72_RS16695 (PVT72_16695)	degS	3430401..3431564 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
PVT72_RS16700 (PVT72_16700)	-	3431787..3432434 (+)	648	WP_003151384.1	YigZ family protein	-
PVT72_RS16705 (PVT72_16705)	-	3432439..3433653 (+)	1215	WP_024085868.1	LCP family protein	-
PVT72_RS16710 (PVT72_16710)	-	3433743..3434819 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
PVT72_RS16715 (PVT72_16715)	-	3434952..3436148 (-)	1197	WP_024085869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=792817 PVT72_RS16695 WP_003151385.1 3430401..3431564(-) (degS) [Bacillus velezensis strain FC02]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=792817 PVT72_RS16695 WP_003151385.1 3430401..3431564(-) (degS) [Bacillus velezensis strain FC02]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948