Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PVT72_RS06930 Genome accession   NZ_CP118495
Coordinates   1386947..1387411 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain FC02     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1381947..1392411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVT72_RS06910 (PVT72_06910) - 1382427..1384247 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  PVT72_RS06915 (PVT72_06915) - 1384273..1385442 (-) 1170 WP_007611083.1 aminotransferase A -
  PVT72_RS06920 (PVT72_06920) - 1385643..1385804 (-) 162 WP_264254947.1 hypothetical protein -
  PVT72_RS06925 (PVT72_06925) cheV 1385993..1386904 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  PVT72_RS06930 (PVT72_06930) kre 1386947..1387411 (-) 465 WP_003154622.1 YkyB family protein Regulator
  PVT72_RS06935 (PVT72_06935) - 1387534..1388826 (-) 1293 WP_046559548.1 MFS transporter -
  PVT72_RS06940 (PVT72_06940) - 1388902..1389396 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  PVT72_RS06945 (PVT72_06945) - 1389471..1390334 (-) 864 WP_015388306.1 metallophosphoesterase -
  PVT72_RS06950 (PVT72_06950) fadH 1390478..1391242 (+) 765 WP_274799510.1 2,4-dienoyl-CoA reductase -
  PVT72_RS06955 (PVT72_06955) - 1391353..1391901 (+) 549 Protein_1311 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=792780 PVT72_RS06930 WP_003154622.1 1386947..1387411(-) (kre) [Bacillus velezensis strain FC02]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=792780 PVT72_RS06930 WP_003154622.1 1386947..1387411(-) (kre) [Bacillus velezensis strain FC02]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929