Detailed information NTG0792760

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: PVT72_RS01960
• Genome accession: NZ_CP118495
• Coordinates: 382690..383838 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FC02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 377690..388838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVT72_RS01940 (PVT72_01940)	-	378087..378770 (-)	684	WP_264254694.1	ABC transporter ATP-binding protein	-
PVT72_RS01945 (PVT72_01945)	-	378785..380221 (-)	1437	WP_274799469.1	ABC transporter permease	-
PVT72_RS01950 (PVT72_01950)	-	380434..381117 (+)	684	WP_264254692.1	response regulator transcription factor	-
PVT72_RS01955 (PVT72_01955)	-	381104..382537 (+)	1434	WP_161625271.1	HAMP domain-containing sensor histidine kinase	-
PVT72_RS01960 (PVT72_01960)	rapC	382690..383838 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
PVT72_RS01965 (PVT72_01965)	phrC	383822..383941 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
PVT72_RS01970 (PVT72_01970)	-	384091..384186 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
PVT72_RS01975 (PVT72_01975)	-	384281..385645 (-)	1365	WP_014304341.1	aspartate kinase	-
PVT72_RS01980 (PVT72_01980)	ceuB	386060..387013 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
PVT72_RS01985 (PVT72_01985)	-	387003..387950 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
PVT72_RS01990 (PVT72_01990)	-	387944..388702 (+)	759	WP_264254691.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=792760 PVT72_RS01960 WP_003156336.1 382690..383838(+) (rapC) [Bacillus velezensis strain FC02]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=792760 PVT72_RS01960 WP_003156336.1 382690..383838(+) (rapC) [Bacillus velezensis strain FC02]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568