Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   PVT72_RS01800 Genome accession   NZ_CP118495
Coordinates   341889..342053 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain FC02     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 336889..347053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVT72_RS01795 (PVT72_01795) srfAB 338780..341872 (+) 3093 Protein_313 surfactin non-ribosomal peptide synthetase SrfAB -
  PVT72_RS01800 (PVT72_01800) comS 341889..342053 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=792759 PVT72_RS01800 WP_269465305.1 341889..342053(+) (comS) [Bacillus velezensis strain FC02]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=792759 PVT72_RS01800 WP_269465305.1 341889..342053(+) (comS) [Bacillus velezensis strain FC02]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5