Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   QMM33_RS02725 Genome accession   NZ_AP025940
Coordinates   530779..531045 (+) Length   88 a.a.
NCBI ID   WP_001820593.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700204     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 525779..536045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM33_RS02705 (PC0204_05210) - 525994..526503 (+) 510 WP_000619941.1 N-acetyltransferase -
  QMM33_RS02710 (PC0204_05220) pheT 526580..528982 (+) 2403 WP_050207281.1 phenylalanine--tRNA ligase subunit beta -
  QMM33_RS02715 (PC0204_05230) - 529050..530051 (-) 1002 WP_050207280.1 endonuclease/exonuclease/phosphatase family protein -
  QMM33_RS02720 (PC0204_05240) - 530207..530695 (+) 489 Protein_539 helix-turn-helix domain-containing protein -
  QMM33_RS02725 (PC0204_05250) HI0659 530779..531045 (+) 267 WP_001820593.1 helix-turn-helix transcriptional regulator Machinery gene
  QMM33_RS02730 (PC0204_05260) metE 531306..533555 (+) 2250 WP_050207278.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  QMM33_RS02735 (PC0204_05270) metF 533619..534485 (+) 867 WP_000089979.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9670.12 Da        Isoelectric Point: 4.3934

>NTDB_id=79262 QMM33_RS02725 WP_001820593.1 530779..531045(+) (HI0659) [Streptococcus pneumoniae strain PZ900700204]
MEGCPSELFSKEEILESDMRVAIMSELIEARHEQGINQRKLEELSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=79262 QMM33_RS02725 WP_001820593.1 530779..531045(+) (HI0659) [Streptococcus pneumoniae strain PZ900700204]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATTATGAGCGAGTT
GATTGAAGCTAGACATGAACAAGGAATCAATCAGAGAAAGCTAGAAGAACTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489