Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   QMM33_RS00960 Genome accession   NZ_AP025940
Coordinates   179107..179547 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700204     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 174107..184547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM33_RS00935 (PC0204_01690) - 174368..175654 (+) 1287 WP_000278865.1 response regulator transcription factor -
  QMM33_RS00940 (PC0204_01700) - 175706..176239 (+) 534 WP_000729029.1 hypothetical protein -
  QMM33_RS00945 (PC0204_01710) nrdI 176317..176787 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  QMM33_RS00950 (PC0204_01720) - 177080..178342 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  QMM33_RS00955 (PC0204_01730) - 178652..179110 (-) 459 WP_000745059.1 DUF3021 domain-containing protein -
  QMM33_RS00960 (PC0204_01740) brsR 179107..179547 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  QMM33_RS00965 (PC0204_01750) hexB 179903..181852 (+) 1950 WP_281739249.1 DNA mismatch repair endonuclease MutL Machinery gene
  QMM33_RS00970 (PC0204_01760) ribE 182177..182644 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  QMM33_RS00975 (PC0204_01770) - 182645..183850 (-) 1206 WP_001854153.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  QMM33_RS00980 (PC0204_01780) ribE 183870..184505 (-) 636 WP_000493839.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=79244 QMM33_RS00960 WP_000861968.1 179107..179547(-) (brsR) [Streptococcus pneumoniae strain PZ900700204]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=79244 QMM33_RS00960 WP_000861968.1 179107..179547(-) (brsR) [Streptococcus pneumoniae strain PZ900700204]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363

Multiple sequence alignment