Detailed information NTG0792263

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV011_RS07345
• Genome accession: NZ_CP118365
• Coordinates: 1532221..1533324 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA31
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527221..1538324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV011_RS07320 (PV011_07335)	-	1529098..1529484 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV011_RS07325 (PV011_07340)	-	1529492..1530625 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV011_RS07330 (PV011_07345)	-	1530689..1530940 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV011_RS07335 (PV011_07350)	coaD	1530995..1531504 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV011_RS07340 (PV011_07355)	rsmD	1531525..1532145 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV011_RS07345 (PV011_07360)	pilA	1532221..1533324 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV011_RS07350 (PV011_07365)	-	1533371..1534969 (-)	1599	Protein_1439	CYTH and CHAD domain-containing protein	-
PV011_RS07355 (PV011_07375)	phnE	1535154..1535975 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV011_RS07360 (PV011_07380)	phnE	1535972..1536841 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV011_RS07365 (PV011_07385)	-	1536859..1537344 (-)	486	Protein_1442	phosphonate ABC transporter ATP-binding protein	-
PV011_RS07370 (PV011_07390)	-	1537338..1538288 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792263 PV011_RS07345 WP_023853086.1 1532221..1533324(+) (pilA) [Bordetella pertussis strain SA31]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792263 PV011_RS07345 WP_023853086.1 1532221..1533324(+) (pilA) [Bordetella pertussis strain SA31]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507