Detailed information NTG0792255

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV010_RS16570
• Genome accession: NZ_CP118364
• Coordinates: 3456987..3458090 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3451987..3463090

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV010_RS16545 (PV010_16565)	-	3453864..3454250 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV010_RS16550 (PV010_16570)	-	3454258..3455391 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV010_RS16555 (PV010_16575)	-	3455455..3455706 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV010_RS16560 (PV010_16580)	coaD	3455761..3456270 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV010_RS16565 (PV010_16585)	rsmD	3456291..3456911 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV010_RS16570 (PV010_16590)	pilA	3456987..3458090 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV010_RS16575 (PV010_16595)	-	3458137..3459735 (-)	1599	Protein_3251	CYTH and CHAD domain-containing protein	-
PV010_RS16580 (PV010_16605)	phnE	3459920..3460741 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV010_RS16585 (PV010_16610)	phnE	3460738..3461607 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV010_RS16590 (PV010_16615)	-	3461625..3462110 (-)	486	Protein_3254	phosphonate ABC transporter ATP-binding protein	-
PV010_RS16595 (PV010_16620)	-	3462104..3463054 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792255 PV010_RS16570 WP_023853086.1 3456987..3458090(+) (pilA) [Bordetella pertussis strain SA30]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792255 PV010_RS16570 WP_023853086.1 3456987..3458090(+) (pilA) [Bordetella pertussis strain SA30]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507