Detailed information NTG0792242

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV009_RS16570
• Genome accession: NZ_CP118363
• Coordinates: 3459074..3460183 (+)
• Length: 369 a.a.
• NCBI ID: WP_010931495.1
• Uniprot ID: -
• Organism: Bordetella pertussis strain SA29
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3454074..3465183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV009_RS16545 (PV009_16565)	-	3455957..3456343 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV009_RS16550 (PV009_16570)	-	3456351..3457484 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV009_RS16555 (PV009_16575)	-	3457548..3457799 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV009_RS16560 (PV009_16580)	coaD	3457854..3458363 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV009_RS16565 (PV009_16585)	rsmD	3458384..3459004 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV009_RS16570 (PV009_16590)	pilA	3459074..3460183 (+)	1110	WP_010931495.1	signal recognition particle-docking protein FtsY	Machinery gene
PV009_RS16575 (PV009_16595)	-	3460230..3461828 (-)	1599	Protein_3251	CYTH and CHAD domain-containing protein	-
PV009_RS16580 (PV009_16605)	phnE	3462014..3462835 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV009_RS16585 (PV009_16610)	phnE	3462832..3463701 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV009_RS16590 (PV009_16615)	-	3463719..3464204 (-)	486	Protein_3254	phosphonate ABC transporter ATP-binding protein	-
PV009_RS16595 (PV009_16620)	-	3464198..3465148 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 38727.33 Da
• Isoelectric Point: 6.5148

>NTDB_id=792242 PV009_RS16570 WP_010931495.1 3459074..3460183(+) (pilA) [Bordetella pertussis strain SA29]
MPMFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSR
TGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLG
RAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNA
GRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDG
TAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1110 bp

>NTDB_id=792242 PV009_RS16570 WP_010931495.1 3459074..3460183(+) (pilA) [Bordetella pertussis strain SA29]
TTGCCCATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGT
GGACGCAGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGC
CGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGC
ACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGAT
CATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACG
ATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGG
CGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATAC
CTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAAT
GGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCC
GGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATT
GAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCG
GCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGC
ACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGT
GGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (165-367)

• SRP54-type protein, helical bundle domain (SRP54_N) (85-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	93.496	0.504