Detailed information NTG0792216

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV007_RS16900
• Genome accession: NZ_CP118361
• Coordinates: 3489770..3490873 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3484770..3495873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV007_RS16875 (PV007_16890)	-	3486647..3487033 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV007_RS16880 (PV007_16895)	-	3487041..3488174 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV007_RS16885 (PV007_16900)	-	3488238..3488489 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV007_RS16890 (PV007_16905)	coaD	3488544..3489053 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV007_RS16895 (PV007_16910)	rsmD	3489074..3489694 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV007_RS16900 (PV007_16915)	pilA	3489770..3490873 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV007_RS16905 (PV007_16920)	-	3490920..3492518 (-)	1599	Protein_3313	CYTH and CHAD domain-containing protein	-
PV007_RS16910 (PV007_16930)	phnE	3492703..3493524 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV007_RS16915 (PV007_16935)	phnE	3493521..3494390 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV007_RS16920 (PV007_16940)	-	3494408..3494893 (-)	486	Protein_3316	phosphonate ABC transporter ATP-binding protein	-
PV007_RS16925 (PV007_16945)	-	3494887..3495837 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792216 PV007_RS16900 WP_023853086.1 3489770..3490873(+) (pilA) [Bordetella pertussis strain SA27]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792216 PV007_RS16900 WP_023853086.1 3489770..3490873(+) (pilA) [Bordetella pertussis strain SA27]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507