Detailed information NTG0792200

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV006_RS13575
• Genome accession: NZ_CP118360
• Coordinates: 2814631..2815734 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2809631..2820734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV006_RS13550 (PV006_13560)	-	2809666..2810616 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
PV006_RS13555 (PV006_13565)	-	2810610..2811095 (+)	486	Protein_2660	phosphonate ABC transporter ATP-binding protein	-
PV006_RS13560 (PV006_13570)	phnE	2811113..2811982 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV006_RS13565 (PV006_13575)	phnE	2811979..2812800 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV006_RS13570 (PV006_13585)	-	2812986..2814584 (+)	1599	Protein_2663	CYTH and CHAD domain-containing protein	-
PV006_RS13575 (PV006_13590)	pilA	2814631..2815734 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV006_RS13580 (PV006_13595)	rsmD	2815810..2816430 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV006_RS13585 (PV006_13600)	coaD	2816451..2816960 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV006_RS13590 (PV006_13605)	-	2817015..2817266 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV006_RS13595 (PV006_13610)	-	2817330..2818463 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV006_RS13600 (PV006_13615)	-	2818471..2818857 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792200 PV006_RS13575 WP_023853086.1 2814631..2815734(-) (pilA) [Bordetella pertussis strain SA26]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792200 PV006_RS13575 WP_023853086.1 2814631..2815734(-) (pilA) [Bordetella pertussis strain SA26]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507