Detailed information NTG0792112

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ99_RS16530
• Genome accession: NZ_CP118353
• Coordinates: 3448974..3450077 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3443974..3455077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ99_RS16505 (PVZ99_16525)	-	3445851..3446237 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PVZ99_RS16510 (PVZ99_16530)	-	3446245..3447378 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ99_RS16515 (PVZ99_16535)	-	3447442..3447693 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ99_RS16520 (PVZ99_16540)	coaD	3447748..3448257 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ99_RS16525 (PVZ99_16545)	rsmD	3448278..3448898 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ99_RS16530 (PVZ99_16550)	pilA	3448974..3450077 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ99_RS16535 (PVZ99_16555)	-	3450124..3451722 (-)	1599	Protein_3242	CYTH and CHAD domain-containing protein	-
PVZ99_RS16540 (PVZ99_16565)	phnE	3451908..3452729 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ99_RS16545 (PVZ99_16570)	phnE	3452726..3453595 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ99_RS16550 (PVZ99_16575)	-	3453613..3454098 (-)	486	Protein_3245	phosphonate ABC transporter ATP-binding protein	-
PVZ99_RS16555 (PVZ99_16580)	-	3454092..3455042 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792112 PVZ99_RS16530 WP_023853086.1 3448974..3450077(+) (pilA) [Bordetella pertussis strain SA19]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792112 PVZ99_RS16530 WP_023853086.1 3448974..3450077(+) (pilA) [Bordetella pertussis strain SA19]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507