Detailed information NTG0792094

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ97_RS08290
• Genome accession: NZ_CP118351
• Coordinates: 1739313..1740416 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA17
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1734313..1745416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ97_RS08265 (PVZ97_08270)	-	1736190..1736576 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PVZ97_RS08270 (PVZ97_08275)	-	1736584..1737717 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ97_RS08275 (PVZ97_08280)	-	1737781..1738032 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ97_RS08280 (PVZ97_08285)	coaD	1738087..1738596 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ97_RS08285 (PVZ97_08290)	rsmD	1738617..1739237 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ97_RS08290 (PVZ97_08295)	pilA	1739313..1740416 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ97_RS08295 (PVZ97_08300)	-	1740463..1742061 (-)	1599	Protein_1622	CYTH and CHAD domain-containing protein	-
PVZ97_RS08300 (PVZ97_08310)	phnE	1742246..1743067 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ97_RS08305 (PVZ97_08315)	phnE	1743064..1743933 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ97_RS08310 (PVZ97_08320)	-	1743951..1744436 (-)	486	Protein_1625	phosphonate ABC transporter ATP-binding protein	-
PVZ97_RS08315 (PVZ97_08325)	-	1744430..1745380 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792094 PVZ97_RS08290 WP_023853086.1 1739313..1740416(+) (pilA) [Bordetella pertussis strain SA17]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792094 PVZ97_RS08290 WP_023853086.1 1739313..1740416(+) (pilA) [Bordetella pertussis strain SA17]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507