Detailed information NTG0792034

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ92_RS16770
• Genome accession: NZ_CP118346
• Coordinates: 3463144..3464247 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3458144..3469247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ92_RS16745 (PVZ92_16765)	-	3460021..3460407 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PVZ92_RS16750 (PVZ92_16770)	-	3460415..3461548 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ92_RS16755 (PVZ92_16775)	-	3461612..3461863 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ92_RS16760 (PVZ92_16780)	coaD	3461918..3462427 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ92_RS16765 (PVZ92_16785)	rsmD	3462448..3463068 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ92_RS16770 (PVZ92_16790)	pilA	3463144..3464247 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ92_RS16775 (PVZ92_16795)	-	3464294..3465892 (-)	1599	Protein_3291	CYTH and CHAD domain-containing protein	-
PVZ92_RS16780 (PVZ92_16805)	phnE	3466078..3466899 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ92_RS16785 (PVZ92_16810)	phnE	3466896..3467765 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ92_RS16790 (PVZ92_16815)	-	3467783..3468268 (-)	486	Protein_3294	phosphonate ABC transporter ATP-binding protein	-
PVZ92_RS16795 (PVZ92_16820)	-	3468262..3469212 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792034 PVZ92_RS16770 WP_023853086.1 3463144..3464247(+) (pilA) [Bordetella pertussis strain SA12]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792034 PVZ92_RS16770 WP_023853086.1 3463144..3464247(+) (pilA) [Bordetella pertussis strain SA12]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507