Detailed information NTG0792008

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ90_RS16610
• Genome accession: NZ_CP118344
• Coordinates: 3462338..3463441 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3457338..3468441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ90_RS16585 (PVZ90_16605)	-	3459215..3459601 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PVZ90_RS16590 (PVZ90_16610)	-	3459609..3460742 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ90_RS16595 (PVZ90_16615)	-	3460806..3461057 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ90_RS16600 (PVZ90_16620)	coaD	3461112..3461621 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ90_RS16605 (PVZ90_16625)	rsmD	3461642..3462262 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ90_RS16610 (PVZ90_16630)	pilA	3462338..3463441 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ90_RS16615 (PVZ90_16635)	-	3463488..3465086 (-)	1599	Protein_3254	CYTH and CHAD domain-containing protein	-
PVZ90_RS16620 (PVZ90_16645)	phnE	3465271..3466092 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ90_RS16625 (PVZ90_16650)	phnE	3466089..3466958 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ90_RS16630 (PVZ90_16655)	-	3466976..3467461 (-)	486	Protein_3257	phosphonate ABC transporter ATP-binding protein	-
PVZ90_RS16635 (PVZ90_16660)	-	3467455..3468405 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792008 PVZ90_RS16610 WP_023853086.1 3462338..3463441(+) (pilA) [Bordetella pertussis strain SA10]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792008 PVZ90_RS16610 WP_023853086.1 3462338..3463441(+) (pilA) [Bordetella pertussis strain SA10]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507