Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   Q7619_RS02820 Genome accession   NZ_CP131714
Coordinates   546396..546662 (+) Length   88 a.a.
NCBI ID   WP_001814186.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 2008C04-309     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 541396..551662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7619_RS02800 (Q7619_02790) - 541608..542117 (+) 510 WP_000619941.1 N-acetyltransferase -
  Q7619_RS02805 (Q7619_02795) pheT 542194..544599 (+) 2406 WP_000961594.1 phenylalanine--tRNA ligase subunit beta -
  Q7619_RS02810 (Q7619_02800) - 544667..545668 (-) 1002 WP_000597976.1 endonuclease/exonuclease/phosphatase family protein -
  Q7619_RS02815 (Q7619_02805) - 545824..546270 (+) 447 Protein_554 IS30 family transposase -
  Q7619_RS02820 (Q7619_02810) HI0659 546396..546662 (+) 267 WP_001814186.1 helix-turn-helix transcriptional regulator Machinery gene
  Q7619_RS02825 (Q7619_02815) metE 546923..549172 (+) 2250 WP_000108220.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  Q7619_RS02830 (Q7619_02820) metF 549236..550102 (+) 867 WP_000089975.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9641.11 Da        Isoelectric Point: 4.2720

>NTDB_id=791862 Q7619_RS02820 WP_001814186.1 546396..546662(+) (HI0659) [Streptococcus pneumoniae strain 2008C04-309]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=791862 Q7619_RS02820 WP_001814186.1 546396..546662(+) (HI0659) [Streptococcus pneumoniae strain 2008C04-309]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489