Detailed information NTG0791685

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7621_RS09630
• Genome accession: NZ_CP131712
• Coordinates: 1937854..1938753 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904834.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2008C09-280
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1932854..1943753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7621_RS09605 (Q7621_09600)	rsmA	1933184..1934056 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7621_RS09610 (Q7621_09605)	-	1934187..1934495 (-)	309	WP_000333253.1	hypothetical protein	-
Q7621_RS09615 (Q7621_09610)	-	1934488..1935129 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7621_RS09620 (Q7621_09615)	-	1935131..1937161 (-)	2031	WP_000825254.1	bacteriocin-associated integral membrane family protein	-
Q7621_RS09625 (Q7621_09620)	-	1937238..1937534 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
Q7621_RS09630 (Q7621_09625)	comR	1937854..1938753 (-)	900	WP_000904834.1	helix-turn-helix transcriptional regulator	Regulator
Q7621_RS09635 (Q7621_09630)	rnmV	1938825..1939385 (-)	561	WP_000660009.1	ribonuclease M5	-
Q7621_RS09640 (Q7621_09635)	-	1939385..1940158 (-)	774	WP_000575597.1	TatD family hydrolase	-
Q7621_RS09645 (Q7621_09640)	-	1940463..1941356 (-)	894	WP_000226480.1	DUF1542 domain-containing protein	-
Q7621_RS09650 (Q7621_09645)	rpmH	1941640..1941774 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7621_RS09655 (Q7621_09650)	-	1941919..1943133 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
Q7621_RS09660 (Q7621_09655)	-	1943289..1943582 (-)	294	WP_000977368.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35263.10 Da
• Isoelectric Point: 4.9762

>NTDB_id=791685 Q7621_RS09630 WP_000904834.1 1937854..1938753(-) (comR) [Streptococcus pneumoniae strain 2008C09-280]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=791685 Q7621_RS09630 WP_000904834.1 1937854..1938753(-) (comR) [Streptococcus pneumoniae strain 2008C09-280]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361