Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   Q7622_RS07295 Genome accession   NZ_CP131711
Coordinates   1443337..1443801 (-) Length   154 a.a.
NCBI ID   WP_001135764.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 2014C08-275     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1438337..1448801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7622_RS07275 (Q7622_07260) - 1439288..1440256 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  Q7622_RS07280 (Q7622_07265) pdrM 1440410..1441771 (-) 1362 WP_000278544.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  Q7622_RS07285 (Q7622_07270) - 1441782..1442042 (-) 261 WP_001105925.1 hypothetical protein -
  Q7622_RS07290 (Q7622_07275) - 1442056..1443324 (-) 1269 WP_000924465.1 dihydroorotase -
  Q7622_RS07295 (Q7622_07280) mutX 1443337..1443801 (-) 465 WP_001135764.1 8-oxo-dGTP diphosphatase Machinery gene
  Q7622_RS07300 (Q7622_07285) - 1443811..1444464 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  Q7622_RS07305 (Q7622_07290) - 1444600..1445247 (-) 648 WP_001809355.1 hypothetical protein -
  Q7622_RS07310 (Q7622_07295) - 1445261..1445974 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  Q7622_RS07315 (Q7622_07300) dhaM 1446433..1446813 (-) 381 WP_000443787.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  Q7622_RS07320 - 1446813..1446887 (-) 75 Protein_1448 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17786.12 Da        Isoelectric Point: 4.2287

>NTDB_id=791542 Q7622_RS07295 WP_001135764.1 1443337..1443801(-) (mutX) [Streptococcus pneumoniae strain 2014C08-275]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTADLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=791542 Q7622_RS07295 WP_001135764.1 1443337..1443801(-) (mutX) [Streptococcus pneumoniae strain 2014C08-275]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACAGCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981