Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   Q7622_RS03700 Genome accession   NZ_CP131711
Coordinates   729050..729760 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain 2014C08-275     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 724050..734760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7622_RS03670 (Q7622_03665) - 724244..724456 (-) 213 WP_000011696.1 hypothetical protein -
  Q7622_RS03675 (Q7622_03675) - 724935..725144 (-) 210 WP_000953868.1 hypothetical protein -
  Q7622_RS03680 (Q7622_03680) rpsP 725314..725586 (+) 273 WP_000268761.1 30S ribosomal protein S16 -
  Q7622_RS03685 (Q7622_03685) kphA 725606..725845 (+) 240 WP_000379621.1 RNA-binding protein KphA -
  Q7622_RS03690 (Q7622_03690) - 726237..727583 (-) 1347 WP_001816270.1 IS1380-like element ISSpn5 family transposase -
  Q7622_RS03695 (Q7622_03695) - 727750..728893 (-) 1144 Protein_730 transposase -
  Q7622_RS03700 (Q7622_03700) treR 729050..729760 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  Q7622_RS03705 (Q7622_03705) treP 729945..731912 (+) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  Q7622_RS03710 (Q7622_03710) treC 732090..733715 (+) 1626 WP_000171220.1 alpha,alpha-phosphotrehalase -
  Q7622_RS03715 (Q7622_03715) - 733971..734219 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=791509 Q7622_RS03700 WP_000760673.1 729050..729760(-) (treR) [Streptococcus pneumoniae strain 2014C08-275]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=791509 Q7622_RS03700 WP_000760673.1 729050..729760(-) (treR) [Streptococcus pneumoniae strain 2014C08-275]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTCATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593