Detailed information NTG0790983

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7627_RS09475
• Genome accession: NZ_CP131706
• Coordinates: 1843568..1844467 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2018N21-288
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1838568..1849467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7627_RS09450 (Q7627_09430)	rsmA	1838898..1839770 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7627_RS09455 (Q7627_09435)	-	1839901..1840209 (-)	309	WP_000333257.1	hypothetical protein	-
Q7627_RS09460 (Q7627_09440)	-	1840202..1840843 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7627_RS09465 (Q7627_09445)	-	1840845..1842875 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
Q7627_RS09470 (Q7627_09450)	-	1842952..1843248 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
Q7627_RS09475 (Q7627_09455)	comR	1843568..1844467 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
Q7627_RS09480 (Q7627_09460)	rnmV	1844539..1845099 (-)	561	WP_000664448.1	ribonuclease M5	-
Q7627_RS09485 (Q7627_09465)	-	1845099..1845872 (-)	774	WP_000575638.1	TatD family hydrolase	-
Q7627_RS09490 (Q7627_09470)	-	1846177..1847070 (-)	894	Protein_1857	DUF1542 domain-containing protein	-
Q7627_RS09495 (Q7627_09475)	rpmH	1847354..1847488 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7627_RS09500 (Q7627_09480)	-	1847633..1848847 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
Q7627_RS09505 (Q7627_09485)	-	1849003..1849297 (-)	295	Protein_1860	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=790983 Q7627_RS09475 WP_000904833.1 1843568..1844467(-) (comR) [Streptococcus pneumoniae strain 2018N21-288]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=790983 Q7627_RS09475 WP_000904833.1 1843568..1844467(-) (comR) [Streptococcus pneumoniae strain 2018N21-288]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361