Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   PUW21_RS07710 Genome accession   NZ_CP118167
Coordinates   1469544..1470119 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain 21855     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464544..1475119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS07680 (PUW21_07680) dapD 1464730..1465440 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  PUW21_RS07685 (PUW21_07685) dapI 1465510..1466634 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  PUW21_RS07690 (PUW21_07690) ykuS 1466696..1466941 (+) 246 WP_003232382.1 YkuS family protein -
  PUW21_RS07695 (PUW21_07695) mscT 1466978..1467781 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  PUW21_RS07700 (PUW21_07700) ahpA 1468018..1468560 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  PUW21_RS07705 (PUW21_07705) ykuV 1468632..1469078 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  PUW21_RS07710 (PUW21_07710) rok 1469544..1470119 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  PUW21_RS07715 (PUW21_07715) cse15 1470160..1471125 (-) 966 WP_110109385.1 spore protein Cse15 -
  PUW21_RS07720 (PUW21_07720) mobA 1471262..1471861 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  PUW21_RS07725 (PUW21_07725) moeB 1471912..1472931 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  PUW21_RS07730 (PUW21_07730) glp 1472949..1474241 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  PUW21_RS07735 (PUW21_07735) mobB 1474202..1474723 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=790964 PUW21_RS07710 WP_003232378.1 1469544..1470119(+) (rok) [Bacillus subtilis strain 21855]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=790964 PUW21_RS07710 WP_003232378.1 1469544..1470119(+) (rok) [Bacillus subtilis strain 21855]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1