Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PUW21_RS07595 Genome accession   NZ_CP118167
Coordinates   1450315..1450779 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain 21855     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1445315..1455779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS07575 (PUW21_07575) kinA 1445781..1447601 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  PUW21_RS07580 (PUW21_07580) dapX 1447612..1448793 (-) 1182 WP_003232415.1 aminotransferase A -
  PUW21_RS07585 (PUW21_07585) - 1448995..1449156 (-) 162 WP_003245246.1 hypothetical protein -
  PUW21_RS07590 (PUW21_07590) cheV 1449360..1450271 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  PUW21_RS07595 (PUW21_07595) kre 1450315..1450779 (-) 465 WP_003232406.1 YkyB family protein Regulator
  PUW21_RS07600 (PUW21_07600) ykuC 1450905..1452197 (-) 1293 WP_046380992.1 MFS transporter -
  PUW21_RS07605 (PUW21_07605) ltdD 1452273..1452767 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  PUW21_RS07610 (PUW21_07610) ppeE 1452824..1453684 (-) 861 WP_017697271.1 metallophosphoesterase -
  PUW21_RS07615 (PUW21_07615) fadH 1453827..1454591 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=790963 PUW21_RS07595 WP_003232406.1 1450315..1450779(-) (kre) [Bacillus subtilis strain 21855]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=790963 PUW21_RS07595 WP_003232406.1 1450315..1450779(-) (kre) [Bacillus subtilis strain 21855]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1