Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PUW21_RS04585 Genome accession   NZ_CP118167
Coordinates   901208..902002 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain 21855     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896208..907002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS04555 (PUW21_04555) sxzA 897047..898078 (+) 1032 WP_274358393.1 iron ABC transporter permease -
  PUW21_RS04560 (PUW21_04560) yfhB 898193..899074 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  PUW21_RS04565 (PUW21_04565) yfhC 899162..899746 (+) 585 WP_032723010.1 nitroreductase -
  PUW21_RS04570 (PUW21_04570) yfhD 899785..899976 (-) 192 WP_003233561.1 YfhD family protein -
  PUW21_RS04575 (PUW21_04575) yfhE 900043..900153 (-) 111 WP_003223230.1 YfhE family protein -
  PUW21_RS04580 (PUW21_04580) yfhF 900208..901119 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  PUW21_RS04585 (PUW21_04585) recX 901208..902002 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  PUW21_RS04590 (PUW21_04590) yfhH 902004..902318 (+) 315 WP_003244592.1 YfhH family protein -
  PUW21_RS04595 (PUW21_04595) yfhI 902461..903654 (+) 1194 WP_003243500.1 MFS transporter -
  PUW21_RS04600 (PUW21_04600) sspK 903686..903838 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  PUW21_RS04605 (PUW21_04605) yfhJ 903963..904232 (+) 270 WP_015252516.1 YfhJ family protein -
  PUW21_RS04610 (PUW21_04610) yfhK 904377..904895 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  PUW21_RS04615 (PUW21_04615) spdL 904980..905312 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  PUW21_RS04620 (PUW21_04620) ephM 905299..906159 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=790946 PUW21_RS04585 WP_029726844.1 901208..902002(+) (recX) [Bacillus subtilis strain 21855]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=790946 PUW21_RS04585 WP_029726844.1 901208..902002(+) (recX) [Bacillus subtilis strain 21855]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996