Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PTA87_RS00820 Genome accession   NZ_CP118163
Coordinates   185038..185703 (+) Length   221 a.a.
NCBI ID   WP_119635080.1    Uniprot ID   A0A418JLF9
Organism   Staphylococcus hyicus strain SG-7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 180038..190703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PTA87_RS00795 - 180538..181206 (+) 669 WP_274314602.1 response regulator transcription factor -
  PTA87_RS00800 - 181289..182203 (+) 915 WP_257071197.1 ABC transporter ATP-binding protein -
  PTA87_RS00805 - 182196..182948 (+) 753 WP_167696245.1 hypothetical protein -
  PTA87_RS00810 - 183212..183883 (+) 672 WP_274314607.1 sensor histidine kinase -
  PTA87_RS00815 - 184470..184907 (-) 438 WP_209260594.1 VOC family protein -
  PTA87_RS00820 braR 185038..185703 (+) 666 WP_119635080.1 response regulator transcription factor Regulator
  PTA87_RS00825 braS 185712..186623 (+) 912 WP_107642911.1 sensor histidine kinase Regulator
  PTA87_RS00830 - 186714..187463 (+) 750 WP_119635081.1 ABC transporter ATP-binding protein -
  PTA87_RS00835 - 187465..189426 (+) 1962 WP_274314613.1 ABC transporter permease -
  PTA87_RS00840 - 189663..190289 (-) 627 WP_119635083.1 FMN-dependent NADH-azoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25848.04 Da        Isoelectric Point: 6.6922

>NTDB_id=790857 PTA87_RS00820 WP_119635080.1 185038..185703(+) (braR) [Staphylococcus hyicus strain SG-7]
MKIMIVEDDFTIAESLVKELQKWNHEAVNVQDYYHITEKFQTLQPHLVLLDINLPHLNGFHWCQEIRQKSQVPIIFISSA
SDNMNQMMAIQMGADDFIEKPFNLKLTIMKIQALLRRSYDFKVEQSQLHVKGCALVVDKALLIYQDQTLSLTLTELQILQ
QLFINEGHFVNRNTLIEHCWQSENFIDDNTLAVNMSRIRKKLKELGLVDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=790857 PTA87_RS00820 WP_119635080.1 185038..185703(+) (braR) [Staphylococcus hyicus strain SG-7]
ATGAAGATTATGATTGTTGAGGATGATTTTACAATTGCAGAAAGTTTAGTCAAAGAACTTCAAAAATGGAATCATGAAGC
GGTAAATGTGCAAGATTATTATCATATAACTGAAAAATTCCAAACGCTTCAACCTCACCTCGTTCTTTTAGATATCAACC
TTCCACATCTTAATGGCTTTCATTGGTGTCAGGAAATACGGCAAAAATCTCAAGTACCTATTATATTTATTAGTTCGGCT
TCGGATAATATGAATCAAATGATGGCCATCCAAATGGGGGCTGATGATTTTATAGAAAAGCCGTTTAATTTAAAGTTAAC
AATTATGAAAATTCAAGCGTTATTGAGGCGATCCTATGACTTTAAAGTGGAACAATCTCAGTTACACGTAAAAGGATGTG
CGTTAGTTGTTGATAAAGCTTTATTGATATATCAAGATCAAACGCTGTCGCTAACGCTAACAGAGTTACAAATTTTACAA
CAATTATTTATAAATGAAGGACATTTTGTGAATCGTAATACATTAATTGAGCACTGTTGGCAATCTGAAAATTTCATTGA
TGACAATACGTTAGCAGTAAATATGTCTCGTATACGTAAGAAGTTAAAAGAACTAGGTTTAGTGGATTTTATACAAACGA
AAAAGAATGTAGGATACAAAGTATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-105)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A418JLF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

67.421

100

0.674