Detailed information NTG0790443

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PUP70_RS10110
• Genome accession: NZ_CP118141
• Coordinates: 2219950..2222181 (+)
• Length: 743 a.a.
• NCBI ID: WP_053260193.1
• Uniprot ID: -
• Organism: Pseudomonas chlororaphis strain ATCC 17814
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2214950..2227181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUP70_RS10085 (PUP70_10085)	-	2216071..2216730 (+)	660	WP_007931646.1	transglutaminase-like domain-containing protein	-
PUP70_RS10090 (PUP70_10090)	-	2216773..2217396 (+)	624	WP_053260191.1	glutathione S-transferase family protein	-
PUP70_RS10095 (PUP70_10095)	-	2217529..2218461 (+)	933	WP_007931649.1	ABC transporter ATP-binding protein	-
PUP70_RS10100 (PUP70_10100)	-	2218458..2219237 (+)	780	WP_007931651.1	ABC transporter permease	-
PUP70_RS10105 (PUP70_10105)	-	2219286..2219801 (-)	516	WP_053260192.1	DUF2062 domain-containing protein	-
PUP70_RS10110 (PUP70_10110)	comA	2219950..2222181 (+)	2232	WP_053260193.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PUP70_RS10115 (PUP70_10115)	exbB	2222284..2222919 (+)	636	WP_007931657.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PUP70_RS10120 (PUP70_10120)	-	2222916..2223344 (+)	429	WP_007931660.1	ExbD/TolR family protein	-
PUP70_RS10125 (PUP70_10125)	lpxK	2223344..2224354 (+)	1011	WP_053260194.1	tetraacyldisaccharide 4'-kinase	-
PUP70_RS10130 (PUP70_10130)	-	2224377..2224562 (+)	186	WP_007931663.1	Trm112 family protein	-
PUP70_RS10135 (PUP70_10135)	kdsB	2224559..2225323 (+)	765	WP_053260195.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PUP70_RS10140 (PUP70_10140)	-	2225323..2225787 (+)	465	WP_007931667.1	low molecular weight protein-tyrosine-phosphatase	-
PUP70_RS10145 (PUP70_10145)	murB	2225784..2226803 (+)	1020	WP_053260196.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 81142.21 Da
• Isoelectric Point: 9.7323

>NTDB_id=790443 PUP70_RS10110 WP_053260193.1 2219950..2222181(+) (comA) [Pseudomonas chlororaphis strain ATCC 17814]
MRTGMLALAAGLLCLRFLPALPAIGWLAVLPVVALMLLPFRTYPLALFLLGLAWACISAQWALDDRLAEPLDGQTHWLEG
RVVGLPQQTEGLVRFELEDGRARRGRIPQRLRLAWYGGPPVHSGERWRLAVKLKRPAGLVNLQAFDHEAWLLAQRIGATG
TVKDGQLLATTRESWRARIRQRLLQVDAHGRAGGLAALVLGDGSGLSQEDWRVLQDTGTVHLMVISGQHISLLAAVMYAL
VAGLARYGLWPGRWPWLPWACGLAFASALGYGLLAGFDVPVRRACVMVALVLIWRLRFRHLGAWWPFLLALNAVLLFEPL
ASLQPGFWLSFTAVAVLILIFGGRLGGWRWWQSWTRIQWLIAIGLCPVLLALGLPISLSGPLANLLAEPWISLLVLPPAL
LGTLLLAVPYLGEGLLWLAGGLLDLLFRGLTLLAAQWPAWVAPAIPLWAWSISALGALLLLLPAGVPLRPLGWPMLLLVV
FPPKNTLPYGEAEVWQLDVGQGLAVLVRTREHAMLYDAGPRFGDSDLGARVVLPSLRKLGVAHLDLMLLSHADADHAGGA
DAISRGLPVARLVSGDPEGLPAYLPAEPCASGEQWQWDGVRFSLWQWAGAQNGNQKSCVMQVEAKGERLLLTGDIDALAE
RALLDTPLAVETHWLQAPHHGSRSSSSAALLKALAPSAVLISRGHGNGFGHPHPQVVERYRQQGTAIYDSAEQGALRLML
GTYTEPTSLRAQRRFWRKWPLSP

Nucleotide

• Length: 2232 bp

>NTDB_id=790443 PUP70_RS10110 WP_053260193.1 2219950..2222181(+) (comA) [Pseudomonas chlororaphis strain ATCC 17814]
ATGCGCACAGGGATGCTGGCGTTGGCGGCGGGGCTTTTATGCCTGCGCTTTTTGCCGGCGCTACCAGCGATCGGATGGCT
GGCAGTGCTGCCGGTGGTGGCCTTGATGCTGTTGCCGTTTCGCACCTATCCATTGGCCCTCTTTCTGTTGGGCCTGGCGT
GGGCCTGCATCAGCGCGCAATGGGCGCTGGATGATCGTTTGGCGGAACCGCTCGACGGGCAGACTCACTGGCTCGAAGGT
CGAGTGGTGGGGCTGCCGCAGCAGACCGAGGGGCTGGTGCGTTTCGAGCTGGAAGACGGGCGGGCGCGGCGCGGCCGGAT
CCCGCAACGCCTGCGCCTGGCCTGGTATGGCGGGCCGCCGGTGCACAGCGGCGAACGCTGGCGCCTGGCGGTGAAGCTCA
AGCGACCTGCCGGCCTGGTCAATCTGCAGGCCTTCGATCACGAGGCCTGGTTGCTGGCCCAGCGCATCGGCGCCACGGGC
ACGGTCAAGGATGGGCAATTGCTGGCCACCACCCGGGAGAGTTGGCGTGCGCGCATTCGCCAGCGCTTGCTGCAAGTCGA
TGCCCATGGGCGCGCCGGCGGCCTGGCGGCCCTGGTACTGGGCGACGGCTCGGGCTTGAGCCAGGAAGACTGGCGTGTCT
TGCAAGACACCGGGACCGTGCACCTGATGGTGATTTCCGGGCAGCACATCAGCTTGCTGGCCGCGGTGATGTACGCCCTG
GTGGCGGGGCTGGCCCGTTACGGCCTGTGGCCCGGACGCTGGCCCTGGCTGCCCTGGGCCTGTGGACTGGCGTTCGCTTC
GGCCCTGGGGTACGGATTGCTGGCGGGGTTCGATGTGCCGGTGCGCCGTGCCTGCGTGATGGTGGCCCTGGTGCTGATCT
GGCGCCTGCGCTTTCGCCACCTGGGTGCCTGGTGGCCGTTCCTGCTGGCATTGAATGCGGTGCTGTTGTTCGAGCCGCTG
GCCAGTCTGCAGCCAGGTTTCTGGCTGTCCTTTACCGCGGTGGCGGTGCTGATCCTGATCTTCGGCGGGCGCCTGGGAGG
CTGGCGCTGGTGGCAGTCCTGGACCCGCATTCAATGGTTGATCGCCATCGGCCTGTGCCCGGTGCTGCTGGCGCTGGGGT
TGCCCATCAGTCTCAGCGGGCCGCTGGCCAATCTGCTGGCGGAACCCTGGATCAGCCTGCTGGTGCTGCCGCCGGCGTTG
CTCGGCACCTTGTTGCTGGCGGTGCCTTACCTGGGCGAAGGCTTGCTCTGGCTGGCCGGTGGTTTGCTGGACCTGCTGTT
CCGCGGCCTGACCCTGCTGGCTGCCCAGTGGCCGGCGTGGGTAGCGCCGGCCATACCGCTCTGGGCCTGGAGCATCAGCG
CGCTGGGAGCCTTGCTGCTGTTGCTGCCTGCGGGCGTGCCGCTGCGTCCCTTGGGCTGGCCGATGCTGCTGTTGGTGGTG
TTCCCGCCGAAAAACACGCTGCCATATGGCGAGGCGGAAGTCTGGCAGCTGGATGTCGGGCAGGGCCTGGCGGTGCTGGT
ACGGACTCGCGAGCACGCGATGCTGTATGACGCCGGTCCGCGTTTTGGCGATTCCGACCTGGGCGCGCGGGTGGTGCTGC
CGTCCTTGCGCAAGCTGGGCGTCGCGCACCTCGACCTGATGCTGCTCAGCCACGCCGATGCCGATCATGCCGGTGGCGCC
GACGCCATTTCGCGCGGCTTGCCGGTGGCCAGGCTGGTCAGCGGCGATCCCGAGGGTTTGCCGGCCTATTTACCGGCAGA
GCCTTGCGCCAGCGGCGAGCAGTGGCAATGGGACGGGGTGCGTTTTTCCCTGTGGCAATGGGCAGGTGCGCAGAACGGTA
ACCAGAAGTCCTGCGTGATGCAGGTCGAGGCCAAGGGCGAGCGTTTGCTGCTGACGGGGGATATCGATGCCCTGGCCGAG
CGCGCCTTGCTGGATACCCCGCTGGCCGTCGAGACCCACTGGTTGCAGGCGCCGCATCACGGCAGCCGCAGCTCGTCGTC
CGCGGCCCTGCTCAAGGCCCTTGCGCCTTCGGCGGTGCTGATTTCCCGTGGGCACGGCAATGGGTTTGGGCATCCGCACC
CGCAGGTCGTCGAACGTTATCGCCAGCAAGGGACCGCCATTTACGACAGTGCGGAGCAGGGAGCGCTGCGGCTGATGCTG
GGCACCTACACCGAACCGACGAGCCTGCGGGCGCAGCGGCGCTTTTGGCGCAAATGGCCACTATCTCCTTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Competence protein (Competence) (198-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	64.534	96.77	0.624