Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QMM10_RS05145 Genome accession   NZ_AP025938
Coordinates   1013617..1014081 (+) Length   154 a.a.
NCBI ID   WP_001135760.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900701057     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1008617..1019081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM10_RS10600 - 1010533..1010607 (+) 75 Protein_1019 dihydroxyacetone kinase subunit L -
  QMM10_RS05125 dhaM 1010607..1010986 (+) 380 Protein_1020 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  QMM10_RS05130 (PC1044_10110) - 1011444..1012157 (+) 714 WP_000499433.1 YjjG family noncanonical pyrimidine nucleotidase -
  QMM10_RS05135 (PC1044_10120) - 1012171..1012818 (+) 648 WP_075218829.1 hypothetical protein -
  QMM10_RS05140 (PC1044_10130) - 1012954..1013607 (+) 654 WP_001809694.1 uracil-DNA glycosylase -
  QMM10_RS05145 (PC1044_10140) mutX 1013617..1014081 (+) 465 WP_001135760.1 8-oxo-dGTP diphosphatase Machinery gene
  QMM10_RS05150 (PC1044_10150) - 1014094..1015362 (+) 1269 WP_000924492.1 dihydroorotase -
  QMM10_RS05155 (PC1044_10160) - 1015376..1015636 (+) 261 WP_001105925.1 hypothetical protein -
  QMM10_RS05160 (PC1044_10170) pdrM 1015647..1017008 (+) 1362 WP_281738131.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  QMM10_RS05165 (PC1044_10180) - 1017162..1018130 (+) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=79040 QMM10_RS05145 WP_001135760.1 1013617..1014081(+) (mutX) [Streptococcus pneumoniae strain PZ900701057]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKIERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=79040 QMM10_RS05145 WP_001135760.1 1013617..1014081(+) (mutX) [Streptococcus pneumoniae strain PZ900701057]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGATAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCTAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981

Multiple sequence alignment