Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   MGCS35922_RS07610 Genome accession   NZ_CP118097
Coordinates   1532595..1533632 (-) Length   345 a.a.
NCBI ID   WP_065957291.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1527595..1538632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS35922_RS07585 (MGCS35922_03092) rbsC 1527617..1528558 (-) 942 WP_022554979.1 hypothetical protein -
  MGCS35922_RS07590 (MGCS35922_03094) - 1528560..1530038 (-) 1479 WP_084916587.1 sugar ABC transporter ATP-binding protein -
  MGCS35922_RS07595 (MGCS35922_03096) rbsD 1530054..1530452 (-) 399 WP_003051896.1 D-ribose pyranase -
  MGCS35922_RS07600 (MGCS35922_03098) rbsK 1530427..1531338 (-) 912 WP_003061715.1 ribokinase -
  MGCS35922_RS07605 (MGCS35922_03100) - 1531331..1532314 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  MGCS35922_RS07610 (MGCS35922_03102) sepM 1532595..1533632 (-) 1038 WP_065957291.1 SepM family pheromone-processing serine protease Regulator
  MGCS35922_RS07615 (MGCS35922_03104) coaD 1533619..1534110 (-) 492 WP_065957290.1 pantetheine-phosphate adenylyltransferase -
  MGCS35922_RS07620 (MGCS35922_03106) rsmD 1534100..1534639 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  MGCS35922_RS07625 (MGCS35922_03108) asnA 1534874..1535866 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  MGCS35922_RS07630 (MGCS35922_03110) arcC 1536193..1537143 (-) 951 WP_046178063.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37617.20 Da        Isoelectric Point: 9.4270

>NTDB_id=790114 MGCS35922_RS07610 WP_065957291.1 1532595..1533632(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRTVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=790114 MGCS35922_RS07610 WP_065957291.1 1532595..1533632(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGAACTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.304

100

0.713