Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PUW52_RS01700 Genome accession   NZ_CP118078
Coordinates   313743..314474 (+) Length   243 a.a.
NCBI ID   WP_024052174.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI16     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 308743..319474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS01670 (PUW52_01670) - 309317..310756 (+) 1440 WP_024052180.1 NCS2 family permease -
  PUW52_RS01675 (PUW52_01675) tsaE 310843..311283 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PUW52_RS01680 (PUW52_01680) - 311276..311797 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  PUW52_RS01685 (PUW52_01685) - 311805..312920 (+) 1116 WP_024052177.1 LCP family protein -
  PUW52_RS01690 (PUW52_01690) - 312967..313254 (-) 288 WP_024052176.1 hypothetical protein -
  PUW52_RS01695 (PUW52_01695) - 313264..313674 (-) 411 WP_024052175.1 HIT family protein -
  PUW52_RS01700 (PUW52_01700) pptA 313743..314474 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  PUW52_RS01705 (PUW52_01705) - 314471..315516 (+) 1046 Protein_295 ABC transporter permease -
  PUW52_RS01710 (PUW52_01710) - 315567..316364 (+) 798 WP_070241539.1 phosphotransferase family protein -
  PUW52_RS01715 (PUW52_01715) trmB 316361..316996 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PUW52_RS01720 (PUW52_01720) - 317625..318314 (+) 690 WP_042754037.1 VIT family protein -
  PUW52_RS01725 (PUW52_01725) rimP 318583..319053 (+) 471 WP_306806738.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26900.57 Da        Isoelectric Point: 4.7336

>NTDB_id=789825 PUW52_RS01700 WP_024052174.1 313743..314474(+) (pptA) [Streptococcus anginosus strain VSI16]
MLEIKGLIGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKVKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=789825 PUW52_RS01700 WP_024052174.1 313743..314474(+) (pptA) [Streptococcus anginosus strain VSI16]
ATGTTAGAAATAAAAGGGCTTATAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGTAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCTTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708
  pptA Streptococcus salivarius strain HSISS4

71.548

98.354

0.704