Detailed information NTG0789714

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: Q7648_RS09930
• Genome accession: NZ_CP131632
• Coordinates: 1888118..1891216 (+)
• Length: 1032 a.a.
• NCBI ID: WP_341944680.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 2018S05-288
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1883118..1896216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7648_RS09910 (Q7648_10010)	-	1883815..1884264 (-)	450	WP_003692085.1	CopD family copper resistance protein	-
Q7648_RS09915 (Q7648_10015)	waaA	1884305..1885576 (-)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
Q7648_RS09920 (Q7648_10020)	gnd	1885639..1887087 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
Q7648_RS09925 (Q7648_10025)	-	1887167..1887430 (-)	264	WP_017147189.1	hypothetical protein	-
Q7648_RS09930 (Q7648_10030)	pilC	1888118..1891216 (+)	3099	WP_341944680.1	PilC family type IV pilus tip adhesin	Machinery gene
Q7648_RS09935 (Q7648_10035)	-	1892212..1892496 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
Q7648_RS09940 (Q7648_10040)	yccS	1892976..1895126 (-)	2151	WP_003697785.1	YccS family putative transporter	-

Sequence

Protein

• Length: 1032 a.a.
• Molecular weight: 112170.35 Da
• Isoelectric Point: 9.9287

>NTDB_id=789714 Q7648_RS09930 WP_341944680.1 1888118..1891216(+) (pilC) [Neisseria gonorrhoeae strain 2018S05-288]
MNKTLKRRVFRHTALYAAILMFSHTGGGGGGQAQTHEYAIIMNAQNQPEVRQNGQYSTLREKDRKRKFDFNANGRGGGSV
SFNNNDELVSQQSGTAVFGTATYLPPYGKVSGFDTAELNKRGKAVDWIRTTRIALAGYSYAGVRCGSTSGCPQLVYKTRF
SFENTGLAKNANRLDKHPDSSRENSPIYKLKDYPWLGVSFNLSSENTVKDGRSSNKLISSFSEGNNNQTIVSTTEDHPIS
LGGSQREHTAVAYYLNAKLHLMDKKKIENIAPGKTVQLGILKPSIDVRTRNTGLGLLNFWAKWDIKDNGQIPVKLGLPEV
KAGRCTNATRPNPNAKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRIFLQELKTKTDPGRPGRYSLKPLSDN
EIKGKEPSFTSRQTIIRLDGGVQQIKLDRNKGEVVAFVNLKGNTNNDTFGIVKEANVNLNADEWKKVLLPWTVRGPDNDN
KFKSINQKPEKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDI
QSQESTLAKELRAFAEKGYVGDRYGVDGGFVLRQVELSGQKHVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLFDVKDG
DNNGKNRVKVELGYTVGTPQIGKIRNGKYAAFLASGYAAKDINSNDNKTALYVYDLKNTLGTPIAKIEAPGGKGGLSSPT
LVDKDLDGTVDIAYAGDRGGNMYRFDLSDSNPDKWSVSTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSEEDVVGTDQ
QYIYGIFDDDKPTVNVKVTNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLREGERVTVKPTVVLRTAFVTIRSY
TGNDKCGAQTAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVR
YLDETETDGFSTTADGDAGGSGIDPADRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3099 bp

>NTDB_id=789714 Q7648_RS09930 WP_341944680.1 1888118..1891216(+) (pilC) [Neisseria gonorrhoeae strain 2018S05-288]
ATGAATAAAACTTTGAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGCAGGCGCAAACCCATGAATACGCTATTATCATGAACGCGCAAAACCAGCCCGAGGTACGGCAGAATG
GGCAATATTCAACCTTAAGGGAAAAAGACAGGAAACGCAAATTTGACTTTAATGCGAACGGAAGGGGTGGAGGTTCTGTC
TCATTCAACAATAACGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTA
CGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAAGGCCGTTGATTGGATTCGTACCACCCGCATCG
CGCTGGCAGGCTACAGCTACGCCGGTGTCCGTTGCGGAAGTACCTCAGGCTGTCCCCAACTTGTCTATAAAACCCGATTT
TCCTTCGAAAATACCGGTTTGGCAAAAAATGCAAACAGGCTGGATAAACACCCGGACTCAAGCCGCGAAAATTCGCCCAT
TTACAAATTGAAAGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATGGCAGATCAT
CCAACAAATTGATATCTTCTTTTAGTGAAGGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCACCCTATTTCC
CTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGATGGATAAAAAAAAGAT
TGAAAATATCGCGCCAGGCAAAACAGTGCAGTTGGGTATCTTGAAGCCGAGCATCGATGTGCGGACAAGAAATACGGGGC
TCGGCTTGCTAAATTTTTGGGCTAAGTGGGACATTAAAGATAACGGGCAGATTCCAGTCAAGCTCGGTCTGCCGGAAGTC
AAGGCCGGGCGCTGCACCAACGCCACCCGCCCCAATCCCAACGCCAAAGCCCCTTCGCCGGCCCTGACCGCCCCCGCGCT
GTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCC
GCATCTTCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGCTATTCCCTCAAACCCTTGAGTGATAAT
GAGATTAAAGGTAAAGAGCCGAGTTTCACAAGTCGGCAAACAATCATCCGATTGGATGGCGGCGTACAGCAGATCAAACT
GGATAGAAACAAGGGTGAGGTCGTCGCTTTTGTCAATTTAAAGGGAAACACCAACAACGACACTTTCGGCATTGTTAAGG
AAGCGAACGTCAATCTTAACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAAT
AAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGG
CGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCA
AAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCAAGGATATT
CAAAGCCAAGAATCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGA
CGGCGGCTTTGTCTTGCGCCAAGTCGAACTGAGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTTGGCGGCA
GGGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCCCTGTTTGATGTCAAAGATGGC
GATAATAACGGCAAAAATCGCGTGAAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAATCCGCAACGG
CAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGACATTAACAGCAACGACAATAAAACCGCGCTGTATGTAT
ATGATTTGAAAAACACCTTAGGTACGCCGATTGCAAAAATCGAAGCACCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACG
CTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTT
GAGCGATTCCAATCCTGATAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTT
CCCGACTGGCAGACAAACGCGTGGTCATCTTCGGCACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGGTACGGATCAA
CAATATATTTACGGTATCTTTGACGACGATAAGCCGACGGTTAATGTAAAGGTAACAAACGGCACGGGAGGCGGGCTGCT
CGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTGGGTAG
TGAAATTGAGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATCCGCAGCTAT
ACGGGTAATGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAG
CGCGCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATCCA
TCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGC
TACCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGA
CAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGG
ATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (506-840)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.57	100	0.756