Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   PUW49_RS02520 Genome accession   NZ_CP118054
Coordinates   495255..495965 (-) Length   236 a.a.
NCBI ID   WP_274994907.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI37     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 490255..500965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW49_RS02505 (PUW49_02505) - 490644..491768 (+) 1125 WP_024052060.1 AI-2E family transporter -
  PUW49_RS02510 (PUW49_02510) - 491992..493639 (+) 1648 Protein_454 phosphoenolpyruvate carboxykinase (ATP) -
  PUW49_RS02515 (PUW49_02515) - 493756..495096 (+) 1341 WP_024052057.1 hemolysin family protein -
  PUW49_RS02520 (PUW49_02520) treR 495255..495965 (-) 711 WP_274994907.1 trehalose operon repressor Regulator
  PUW49_RS02525 (PUW49_02525) treP 496145..498157 (+) 2013 WP_070815192.1 PTS system trehalose-specific EIIBC component -
  PUW49_RS02530 (PUW49_02530) treC 498364..499995 (+) 1632 WP_070815191.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27670.72 Da        Isoelectric Point: 9.2637

>NTDB_id=789661 PUW49_RS02520 WP_274994907.1 495255..495965(-) (treR) [Streptococcus anginosus strain VSI37]
MKKYEQIFKLLEQDILNEKYQMNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIVSVLDIDYLDKSFVPSISREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=789661 PUW49_RS02520 WP_274994907.1 495255..495965(-) (treR) [Streptococcus anginosus strain VSI37]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATGAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCTGTTTCCAACCTAACT
AGTTACCAAGAACTTGTTCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
TCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACCAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCCAAAGTTTATCTTGCAGACGGACAACAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTTTCCAAACGGCAAAAATGA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(89-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.407

100

0.644